Gene Information

Name : EcSMS35_2461 (EcSMS35_2461)
Accession : YP_001744505.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 2509525 - 2510427 bp
Length : 903 bp
Strand : -
Note : yfcI; identified by match to protein family HMM PF04754; match to protein family HMM TIGR01784

DNA sequence :
ATGACAATATCGACAACTTCCACGCCGCATGATGCGGTATTTAAATCTTTTTTACGCCATCCAGACACCGCCCGGGATTT
TATTGATATTCATCTCCCCGCGCCGCTGCGCAAACTGTGTGATTTAACGACGCTTAAACTGGAACCAAACAGTTTTATTG
ATGAAGACCTGCGGCAATATTATTCCGACCTCTTGTGGTCTGTGAAAACGCAGGAGGGAGCGGGTTATATTTATGTGGTG
ATAGAGCACCAAAGTAAGCCGGAAGAATTAATGGCTTTTCGCATGATGCGCTATTCCATTGCGGCGATGCAAAACCATCT
TGATGCAGGCTATAAAGAGCTTCCATTGGTGATCCCGATGCTGTTTTATCATGGTTGCAGAAGTCCTTATCCTTATTCAC
TCTGCTGGCTTGATGAATTTGCCGAGCCTGCTATAGCCCGCAAAATATATTCATCAGCTTTTCCGCTGGTGGATATTACC
GTGGTGCCGGATGACGAGATTATGCAACATCGCAAAATGGCGCTGTTGGAGTTAATTCAGAAACATATTCGTCAGCGCGA
TCTGTTGGGATTAGTCGACCAAATTGTTTCGCTGCTAGTTACAGGAAACACTAATGACAGGCAGCTAAAAGCCCTGTTTA
ATTACGTATTACAAACGGGAGATGCCCAGCGTTTCCGTGCATTTATTGGTGAGATAGCGGAACGCGCACCACAAGAAAAG
GAGAAACTGATGACTATTGCTGACAGATTACGTGAAGAAGGGCGGAATGATGGATTAATTCTGGGCAAACGCGAAGAAGC
CCTGCGTATTGCTCAGGAGATGCTGGAGAGAGGTTTAGACAGAGAGTTAGTTATGATGGTGACCCGACTTTCACCAGACG
ATCTTATCGCGCAAAGCCACTAA

Protein sequence :
MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQYYSDLLWSVKTQEGAGYIYVV
IEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDIT
VVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEK
EKLMTIADRLREEGRNDGLILGKREEALRIAQEMLERGLDRELVMMVTRLSPDDLIAQSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 9e-85 57
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 1e-84 57
pilW CAF28495.1 putative transposase Not tested YAPI Protein 1e-85 57
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 8e-77 51
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 3e-63 43