|
Name : lafK (EcSMS35_0248) Accession : YP_001742355.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : lateral flagellar RpoN-interacting regulatory protein LafK Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 261788 - 262774 bp Length : 987 bp Strand : + Note : identified by similarity to GB:CAH19120.1; match to protein family HMM PF00158; match to protein family HMM PF02954 DNA sequence : ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCCTTTAACGTGCC GGTGCTCATTCAGGGCGAAACCGGCGCGGGGAAAGAGTGCGTGGCGAAATATATTCACACCGTAGCCTTTGGTGAAAATG ATAATGCGCCCTATATCGGCGTGAACTGCGCGGCGATCCCGGAAAATATGCTGGAATCGACGTTATTTGGCTACGACAAA GGCGCATTTACCGGCGCAATTGCCAGCGTGCCAGGAAAAATGGAACTGGCAAATAACGGCTCCTTATTGCTCGATGAAAT TGGTGAAATGCCGCTGGCGCTACAGGCCAAAATATTACGCGTGTTGCAGGAACAACAGGTTGAGCGATTAGGCAGCAACC GACAAATCAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAACCTGGAGCAGGAAGTTGCCGCCGGACGTTTTCGT GAAGATCTCTATTATCGTCTGGCGGTGATTCCTATTACCATGCCGCCGCTGCGTGAACGTCTGAACGATATTATTCCGCT GGCAGAGTCATTTATTAAAAAATACTCCACGGTGCTGGTGAAAAATATCACCCTGTCCGAATCCACCCGCCGTGCGCTGC TCAATTACCGTTGGCCCGGTAACGTTCGCCAACTGGAAAACGCCATTCAGCGGGGAATGATTTTAAATCGCGACGGCGTA ATTTACCCGGATGCATTAGGCCTGCCGGACACCGATATTGCTGACCACAGTGAACTGCAATGGCCTGTTCAGCCCGCCGT CCACATTGCCGAAACCGGCGATTTAGGCCAGCACGGACGAAGCGCGCAGTATCAATATATCGCCGACCTGATGCGTAAAT ATCAGGGCAACCGCAGCAAAATCGCTGACCTGTTAGGCATTACCCCGCGCGCACTGCGCTATCGACTGGCCTCCATGCGC AAGCACGGTATCGAAGTTTTCTCCTGA Protein sequence : MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENDNAPYIGVNCAAIPENMLESTLFGYDK GAFTGAIASVPGKMELANNGSLLLDEIGEMPLALQAKILRVLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFR EDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRALLNYRWPGNVRQLENAIQRGMILNRDGV IYPDALGLPDTDIADHSELQWPVQPAVHIAETGDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMR KHGIEVFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 3e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lafK | YP_001742355.1 | lateral flagellar RpoN-interacting regulatory protein LafK | VFG1249 | Protein | 3e-71 | 48 |
