Gene Information

Name : EcSMS35_2275 (EcSMS35_2275)
Accession : YP_001744322.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2297723 - 2299546 bp
Length : 1824 bp
Strand : -
Note : identified by similarity to GB:AAL08429.1

DNA sequence :
ATGCGCATGTTTACAAATCTTTTGTATGATATTTGTACAGTTTTTGAGTTGTTTAAGGAAGGAGAGAGTCCGAGAGATAA
GCGGAAGAGTACTGATTTTGGAGCGCATCAAAGATTCTGGGATCAACGTTATAATGAGCTCAGTCAAATTATTGATGCTG
AAGGGGTGTATAGTCTGGAACAACGGCGAATTATATTTTCCCGGTATGAATATTTTTATTACATGATGAATTCTTACCCT
GTGTATTCAACATTAAAGTCCGAATATATCCGTAACTATTTTCTGAAAAGCTTTGGAGTTGTTTTTATTGTGCTGGATAT
ATATAACACATATCGTCCGGAGAATGAAACAGGGTTTTATTATCATATCTATAATTTTTTGCAAAAATCATATTGTCCCT
GCCTGGATTACTCTGGTACAGAAAGCGATGAGGCTGCCGTTAAACGTTATCTCCGGGAGTATCTTGCTGAACTGGGATTT
AACAGAGAAGATTTTCGGGAAAACGGAAAAATGTATGAGCTGGGAAAATACCAGGGAACTATTCGAAAAGGGTACGGTAA
AAGGAAGAGCCTTATGAAACAATATATAAAGGCCTGTAAGAATGAATACAAGAAGGATTACAGAGAGAAGAAGCTTGATA
AGAGTGAGCTGGACAGAATACTCAACAACATTGACAAGTTCTATTATGCATTTTATTCATTAAGTATTTTGCTTGATATG
CAACGGAAGGTAAAGATACTTGACAGTATTGCATATTATCTCAGAGTGCTGATAAGAGAAGGGCTTTGGGTACATGGGTT
GTATGGCTACGCTGCACGCTATCTTTATGATTTTAATATTTTTGACACAACGCCTTATGCAAGAGCATTACTTGAACGGT
TTCATGAGTTTGAGAGTGGCCCCAAAGGAGCATTAACTCGTTATATTGTGTCACTTGATGATAAATCACAAGAATATATC
GAATCTTTAAAAGATATGGTGTTTAATCTTTCTGATAAGAAAAGTTATGATGATGTATATCTGGAAAACATTATTAATTA
TTTTGAACAGTTGCAGAATGCCCGTGGTTATGTGACCAGGTGCTACATGTTACTGGCCGTCCTTATTTATCTGATTCGGC
GGAACAAACTCCACAAAGCTCTTCGGTTTTATGATGAATCCCCAAAATACGAGTTACCTTCTGGGTATCTTCCCGGCGCT
TTTTCAGTTCTCAGGATAGCGCTGGAGATCAAATTAAACAGGGAGAAAATAAAGCATGGTTCACTGTTCGAATTACTTGA
TTATGTAAAAGCTTATCAGGATGCATTTATGGACTTAAGGGTCGTGACGGATCCTGCGTATAATGAAGATGAAATACAAT
ATGATGCGAATAATTTTACTCTGATGCGTGTCATTAAAATGTATAATTCGATGCTTGCAAATATTAGTACAAAGTCAGAT
ATTCAGCCTCCGTATATTACAGGTCTTCTTGATAATGTAGAGAGGGCGTTAGATAAGATAAATATTCTGATAGATAAAGA
ACGTGTTTACGATGGTGAAACGTTGGCTGAATTAATTACAGAGAACAAAATATTATCCAGTCGTGAAAGTAAAGAAAACC
TGATAGGATTATTTACGGGCAGACACAAATATACTTTACTGCAATGTATTGAGAAGCTTGGCGTATTGGTTGATTATGTA
ATATCACCGGTTGATGATATTAAAAACGTCATGATGTTGTATGGAAATAATGCTGAAAACAAGAACAGACGCAGACTGAT
CTACAACGCATTAACCATCATTTGTGGTGATGATACTAAAAACAACCAGTCAGATCCTCGATGA

Protein sequence :
MRMFTNLLYDICTVFELFKEGESPRDKRKSTDFGAHQRFWDQRYNELSQIIDAEGVYSLEQRRIIFSRYEYFYYMMNSYP
VYSTLKSEYIRNYFLKSFGVVFIVLDIYNTYRPENETGFYYHIYNFLQKSYCPCLDYSGTESDEAAVKRYLREYLAELGF
NREDFRENGKMYELGKYQGTIRKGYGKRKSLMKQYIKACKNEYKKDYREKKLDKSELDRILNNIDKFYYAFYSLSILLDM
QRKVKILDSIAYYLRVLIREGLWVHGLYGYAARYLYDFNIFDTTPYARALLERFHEFESGPKGALTRYIVSLDDKSQEYI
ESLKDMVFNLSDKKSYDDVYLENIINYFEQLQNARGYVTRCYMLLAVLIYLIRRNKLHKALRFYDESPKYELPSGYLPGA
FSVLRIALEIKLNREKIKHGSLFELLDYVKAYQDAFMDLRVVTDPAYNEDEIQYDANNFTLMRVIKMYNSMLANISTKSD
IQPPYITGLLDNVERALDKINILIDKERVYDGETLAELITENKILSSRESKENLIGLFTGRHKYTLLQCIEKLGVLVDYV
ISPVDDIKNVMMLYGNNAENKNRRRLIYNALTIICGDDTKNNQSDPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08429.1 unknown Not tested SRL Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_2275 YP_001744322.1 hypothetical protein VFG1020 Protein 0.0 72