Gene Information

Name : EcSMS35_2251 (EcSMS35_2251)
Accession : YP_001744300.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : putative GTPase
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 2270506 - 2271378 bp
Length : 873 bp
Strand : -
Note : identified by match to protein family HMM PF01926

DNA sequence :
ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCACTTTCTTCCCTGCCTTACTCACTTTCCCGTCACATCCTGGA
ACATCTGCGTAAACTCACCAGTCACGAACCCGTGATTGGCATTATGGGGAAAAGCGGGGCCGGTAAATCCTCACTCTGTA
ATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCGGCGCTTCCGTCTGAGT
GGCCACGGTCACAGCATGGTTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCT
GTACCGTGACATTCTGCCTGAACTTGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGT
ATTTCTGGCGACACATCCTGCACCGGGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGATAAAACGGAGCCCTGC
CATGAATGGGATATGGCCGGTATTCAGCCTTCTCCCGCACAGGCACAGAACATTCGCGAAAAAACGGAGGCGGTATTCCG
TCTGTTCCGGCCCGTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA
TGACAGCACTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGCCTGCAGGACGAGCTGTGCACGGAATCTGTCCGGGGG
CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTGTTGCCTCTGTGGCTCG
TACGGTTCTGCGTGTCGTCCGTGACACGGTGGTCTCTGTTGCCCGCGCTGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS
GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
HEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVRG
QAREQFTGAVDRIFDTAESVCVASVARTVLRVVRDTVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1210 NP_286745.1 histone Not tested TAI Protein 4e-123 99
unnamed AAL08471.1 unknown Not tested SRL Protein 3e-123 99
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 4e-123 99
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 8e-123 99
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 8e-123 99
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 4e-122 98
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 7e-123 98
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-122 98
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 3e-120 97
unnamed AAL99256.1 unknown Not tested LEE Protein 9e-121 97
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 4e-120 97
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 1e-120 97
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-120 96
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 6e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_2251 YP_001744300.1 putative GTPase VFG1062 Protein 2e-123 99
EcSMS35_2251 YP_001744300.1 putative GTPase VFG1674 Protein 2e-122 98
EcSMS35_2251 YP_001744300.1 putative GTPase VFG0654 Protein 2e-120 97
EcSMS35_2251 YP_001744300.1 putative GTPase VFG1612 Protein 3e-43 41