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Name : flu1 (EcSMS35_2249) Accession : YP_001744298.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : antigen 43 Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3468 EC number : - Position : 2267288 - 2270134 bp Length : 2847 bp Strand : - Note : identified by match to protein family HMM PF03212; match to protein family HMM PF03797; match to protein family HMM TIGR01414 DNA sequence : ATGAAACGACATCTGAACACCAGCTACAGGCTGGTATGGAATCACATTACGGGCACCCTGGTGGTGGCTTCCGAACTGGC CCGCTCACGGGGAAAACGCGCCGGTGTGGCGGTTGCGCTGTCTCTTGCTGCTGTCACGCCAGTCCCGGCACTGGCTGCTG ACACGGTTGTAGAGGCGGGAGAAACCGTGAACGGCGGAACACTGACAAATCATGACAACCAGATTGTCTTCGGTACGACC AACGGAATGACCATCAGTACCGGGCTGGAGTATGGGACGGATAACGAGGCCAATACCGGCGGGCAATGGGTACAGGATGG CGGCACAGCCAGTAATACCACCATCAGCAGCGGCGGGCTCCAGTTTGTAGGTGCCGGGGGAAAGGCTACAGACACAATAA TCAATGAAGGAGGCGGACAAAGCCTGAAGGGACTGGCACTGAACACCACGCTGAATGGTGGCGAGCAGTGGATGCATGAA GGTGCGATAGCCACAGGAACCGTCATTAATGATAAGGGCTGGCAGGTCGTCAAACCCGGCGCAGTGGCAACAGACACCGT TGTGAATACCGGCGCAGAAGGAGGACCGGATGCAGAAAATGGTGATACCGGGCAGTTTGTTCGCGGAAATGCCGTACGTA CCACCATCAATAAAAATGGTCGTCAGATTGTGACTGTTGAAGGAACAGCAAATACCACTGTGGTTTATGCCGGCGGCGAC CAGACGGTACATGGCCACGCACTGGATACCACGCTGAATGGCGGTAACCAGTATGTACACAACGGCGGTACAACGTCTGA CACTGTTGTGAACAGTGACGGCTGGCAGATTATCAAGGAAGGTGGTCTGGCGGATTTCACCACCGTTAACCAGAAAGGCA AACTGCAGGTGAACGCCGGTGGTACAGCCACGAATGTCACCCTGAAGCAGGGAGGCGCACTGGTCACCAGTACGGCGGCA ACCGTCACCGGCAGCAACCGTCTGGGCAATTTCGCGGTGGAAAACGGTAAGGCTGACGGTGTTGTTCTGGAGTCCGGCGG TCGTCTGGATGTACTGGAGGGTCATTCAGCGCAGAAAACACGGGTGGATGACGGCGGTACCCTGGCAGTGTCTGCCGGTG GTAAGGCGACAGGTGTCACCATGACATCCGGTGGTGCCCTGATTGCAGACAGTGGTGCCACTGTTGAGGGGACCAATGCC AGCGGTAAGTTCAGTATTGATGGCATATCCGGTCAGGCCAGCGGCCTGCTGCTGGAAAATGGCGGCAGCTTTACGGTTAA TGCCGGGGGACAGGCTGGCAACACCACTGTCGGACATCGTGGAACACTGACGCTGGCTGCCGGGGGAAGTCTGAGTGGCA GAACACAGCTCAGTAAAGGCGCCAGCATGGTACTGAATGGTGATGTGGTCAGTACCGGCGATATTGTTAACGCAGGGGAG ATTCGCTTTGATAATCAGACGACACAGGATGCCGTCCTGAGCCGTGCTGTTGCAAAAGGCGACGCCCCGGTAACGTTCCA TAAACTGACCACCAGTAACCTCACCGGTCAGGGTGGCACCATCAATATGCGTGTTCGCCTTGATGGCAGCAATGCCTCTG ACCAGCTGGTGATTAATGGTGGTCAGGCAACCGGCAAAACCTGGCTTGCGTTCACAAATGTCGGAAACAGTAACCTCGGG GTGGCAACTTCCGGACAGGGTATCCGGGTTGTGGATGCACAGAATGGTGCCACCACAGAAGAAGGTGCGTTTGCCCTGAG TCGCCCGCTTCAGGCCGGTGCCTTTAACTACACCCTGAACCGTGACAGCGATGAAGACTGGTACCTGCGCAGTGAAAATG CTTATCGTGCTGAAGTCCCCCTGTATGCCTCCATGCTGACACAGGCAATGGACTATGACCGGATTCTGGCAGGCTCCCGC AGCCATCAGACCGGTGTAAACGGTGAAAATAACAGCGTCCGTCTCAGCATTCAGGGCGGTCATCTCGGTCACGATAACAA CGGCGGTATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGCTTCGTCCGTCTGGAGAGTGACCTGCTGAGAA CAGAGGTTGCCGGTATGTCTGTGACCGCGGGGGTATATAGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGAC GGCTCCCGCGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCT GTGGGCTGACATTATGGCACAGGGAACCCGCCACAGCATGAAAGCGTCATCGGACAATAACGACTTCCGCGCCCGGGGCT GGGGCTGGCTGGGCTCACTGGAAACCGGTCTGCCCTTCAGTATCACTGACAACCTGATGCTGGAACCACAACTGCAGTAC ACCTGGCAGGGACTTTCCCTGGATGACGGCCAGGATAACGCCGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATAT GCGTGCCGGCTTCCGTCTGGGCAGCCACAACGATATGAGCTTTGGTGAAGGCACCTCATCCCGTGACACCCTGCGCGACA GTGCAAAACACCGTGTGCGTGAACTGCCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGTTCCCGGGGT GACATGAGCATGGGGACAGCCGCCGCCGGCAGTAACATGACGTTCTCACCGTCCCAGAATGGCACGTCACTGGACCTGCA GGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCA GCGCCGAAGGCTATAACGGTCAGGCCACGCTGAATGTGACTTTCTGA Protein sequence : MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTPVPALAADTVVEAGETVNGGTLTNHDNQIVFGTT NGMTISTGLEYGTDNEANTGGQWVQDGGTASNTTISSGGLQFVGAGGKATDTIINEGGGQSLKGLALNTTLNGGEQWMHE GAIATGTVINDKGWQVVKPGAVATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVTVEGTANTTVVYAGGD QTVHGHALDTTLNGGNQYVHNGGTTSDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAA TVTGSNRLGNFAVENGKADGVVLESGGRLDVLEGHSAQKTRVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNA SGKFSIDGISGQASGLLLENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGE IRFDNQTTQDAVLSRAVAKGDAPVTFHKLTTSNLTGQGGTINMRVRLDGSNASDQLVINGGQATGKTWLAFTNVGNSNLG VATSGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSR SHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLESDLLRTEVAGMSVTAGVYSAAGHSSVDVKDDD GSRAGTVRDDAGSLGGYLNLVHTSSGLWADIMAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQY TWQGLSLDDGQDNAGYVKFGHGSAQHMRAGFRLGSHNDMSFGEGTSSRDTLRDSAKHRVRELPVNWWVQPSVIRTFSSRG DMSMGTAAAGSNMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08472.1 | putative autotransporter | Not tested | SRL | Protein | 0.0 | 94 |
| unnamed | CAE85197.1 | antigen43 protein orthologue | Not tested | PAI V 536 | Protein | 0.0 | 94 |
| Z1211 | NP_286746.1 | adhesin | Not tested | TAI | Protein | 0.0 | 88 |
| Z1651 | NP_287154.1 | adhesin | Not tested | TAI | Protein | 0.0 | 88 |
| S3195 | NP_838479.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 66 |
| aec67 | AAW51750.1 | Aec67 | Not tested | AGI-3 | Protein | 0.0 | 66 |
| aidA | ADD91708.1 | AidA | Not tested | PAI-I AL862 | Protein | 0.0 | 60 |
| unnamed | CAD66200.1 | hypothetical protein | Virulence | PAI III 536 | Protein | 0.0 | 59 |
| sap | AAK00474.1 | Sap | Not tested | SHI-1 | Protein | 0.0 | 59 |
| SF2991 | NP_708765.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 59 |
| flu | CAI43838.1 | antigen 43 | Not tested | LEE | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| flu1 | YP_001744298.1 | antigen 43 | VFG1063 | Protein | 0.0 | 94 |
| flu1 | YP_001744298.1 | antigen 43 | VFG1675 | Protein | 0.0 | 59 |
| flu1 | YP_001744298.1 | antigen 43 | VFG0655 | Protein | 0.0 | 59 |
