Gene Information

Name : EcSMS35_2243 (EcSMS35_2243)
Accession : YP_001744292.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : YagB/YeeU/YfjZ family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2263697 - 2264185 bp
Length : 489 bp
Strand : -
Note : identified by match to protein family HMM PF06154

DNA sequence :
ATGAGGCCCTTCTCATCAACGAATATACCTTCACCGAAGCCGGTCTGCGCGCCGGCTGCCCCGTCATCGTTAAACTATCA
TTCACCGATTTTCTGTGAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACGCTTCCCGACGACAACAAAGACCGCC
CCTGGTGGGGGCTGCCCTGCATCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTT
GCAGACCGCGCCGGTATCAGAGGCCGGTTCAGCAATGCGGATGCATACCATCTGGACCAGGCTTTTCCACTGCTGATGAA
ACAACTGGAACTCATGCTCACCAGCGGTGAACTGAATCCCCGGCATCAGCATACCGTCACGCTGTATGCGAAAGGGCTGA
CCTGCGATGCCGACACCCTCGGCTCCTGTGGTTACGTTTATCTGGCTGTTTATCCTGCGACCGAAACGGAAAGTAACCCT
CCGGAATAG

Protein sequence :
MRPFSSTNIPSPKPVCAPAAPSSLNYHSPIFCEDFIVSDTLPGTTLPDDNKDRPWWGLPCIVTPCFGARLVQEGNRLHYL
ADRAGIRGRFSNADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCDADTLGSCGYVYLAVYPATETESNP
PE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-55 93
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-55 93
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-54 92
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 3e-54 92
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 7e-50 91
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 2e-50 91
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 1e-48 89
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-49 89
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 7e-50 89
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 2e-50 88
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 5e-51 88
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 2e-50 88
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 3e-61 87
unnamed AAL57576.1 unknown Not tested LEE Protein 6e-61 85
Z1220 NP_286755.1 structural protein Not tested TAI Protein 1e-47 84
Z1658 NP_287161.1 structural protein Not tested TAI Protein 1e-47 84
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-63 83
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-47 82
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 9e-48 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_2243 YP_001744292.1 YagB/YeeU/YfjZ family protein VFG1619 Protein 8e-51 91
EcSMS35_2243 YP_001744292.1 YagB/YeeU/YfjZ family protein VFG1681 Protein 4e-49 89
EcSMS35_2243 YP_001744292.1 YagB/YeeU/YfjZ family protein VFG0662 Protein 6e-51 88
EcSMS35_2243 YP_001744292.1 YagB/YeeU/YfjZ family protein VFG1068 Protein 1e-47 82