Gene Information

Name : EcSMS35_2241 (EcSMS35_2241)
Accession : YP_001744290.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2262752 - 2263240 bp
Length : 489 bp
Strand : -
Note : -

DNA sequence :
ATGAACCTTTCCCTGACGCCGGAAGCCGACAGCATTAACATGCAGGCGCTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTTAATCTCGCTGAACTGATTAACAAGGTCTCTGAAAACGGTTATTCACTCCGCGTGGTCGATAAATCCGACCAGC
AGTCAACCAGTACACCACCACCGTTAACAACCCTTACCGGCATACGTTGCAGTACCGCACATATCACGGAAACGGACAAC
GCCTGGCTGTACTCGCTGTCACACCAGACTAATGACGACGGCGAAACAGAATGGATTCATTTTACAGGCAGCGGCTATCT
GTTACGTACCGATGCATGGTCGTACCCGGTTCTGCGGCTTAAACGCCTGGGCCTGTCAAGAACGTTCCGTCGTCTGGTCG
TCACTCTCACCCGGCGTTATGGCGTCAGTCTCATTCATCTGGACGCCGGCGCAGAATGTCTGCCGGGGTTCCCCACTTTC
GACTGGTAA

Protein sequence :
MNLSLTPEADSINMQALNMGRIVVDVDGVNLAELINKVSENGYSLRVVDKSDQQSTSTPPPLTTLTGIRCSTAHITETDN
AWLYSLSHQTNDDGETEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGFPTF
DW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 6e-49 98
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 3e-54 95
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 3e-54 95
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-52 91
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-52 91
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 9e-52 89
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 1e-51 88
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-50 88
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 1e-49 87
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 2e-50 86
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 1e-50 86
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 3e-50 84
unnamed AAL08479.1 unknown Not tested SRL Protein 3e-49 84
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 3e-50 84
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 2e-50 84
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 8e-50 83
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 1e-49 83
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 2e-49 83
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 2e-49 83
unnamed AAC31487.1 L0008 Not tested LEE Protein 1e-49 83
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 1e-49 83
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-42 82
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 2e-47 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_2241 YP_001744290.1 hypothetical protein VFG0664 Protein 9e-55 95
EcSMS35_2241 YP_001744290.1 hypothetical protein VFG1070 Protein 1e-49 84
EcSMS35_2241 YP_001744290.1 hypothetical protein VFG1683 Protein 7e-51 84
EcSMS35_2241 YP_001744290.1 hypothetical protein VFG1621 Protein 3e-50 83
EcSMS35_2241 YP_001744290.1 hypothetical protein VFG0787 Protein 5e-50 83
EcSMS35_2241 YP_001744290.1 hypothetical protein VFG1531 Protein 9e-48 81