Gene Information

Name : ssuB (EcSMS35_2186)
Accession : YP_001744236.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Resistance
Product : aliphatic sulfonates transport ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2193402 - 2194169 bp
Length : 768 bp
Strand : +
Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease

DNA sequence : 
ATGAATACTGCTCGTCTGAACCAGGGCACACCATTGTTGCTCAATGCAGTAAGCAAACATTACGCGGAAAATATCGTCCT
GAACCAACTGGATTTACATATTCCGGCAGGTCAGTTTGTGGCGGTGGTGGGCCGCAGCGGTGGTGGCAAAAGTACCCTGC
TGCGCCTGCTGGCAGGTCTGGAAACGCCAACCGCAGGCGACGTGTTAGCGGGCACCACACCGCTGGCTGAGATTCAGGAT
GATACGCGAATGATGTTTCAGGACGCGCGTCTGCTGCCGTGGAAATCGGTGATTGATAACGTTGGGTTAGGCCTTAAAGG
CCAGTGGCGCGATGCGGCGCGTCAGGCTCTGGCTGCGGTAGGACTGGAGAATCGCGCCGGGGAATGGCCTGCCGCACTTT
CTGGCGGGCAGAAACAACGTGTGGCGCTGGCAAGGGCGCTGATTCATCGACCGGGTTTATTGTTACTTGATGAACCACTC
GGTGCGCTGGACGCTTTAACGCGACTCGAGATGCAGGATTTGATTGTGTCGCTTTGGCAGAAGCACGGTTTTACCGTTTT
GCTGGTGACGCATGATGTGAGCGAAGCGGTAGCAATGGCTGACCGGGTGTTATTAATTGAAGAGGGAAAAATTGGTCTGG
ATTTGACAGTGGATATCCCCCGTCCGCGTCGATTAGGGTCGGTGCGATTAGCGGAGCTGGAATCGGAAGTGTTGCAAAGG
GTGATGCAGCGTGGTGAATCTGAAATTCGCCTGAGAAAACAGGGGTAA

Protein sequence : 
MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQD
DTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARQALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPL
GALDALTRLEMQDLIVSLWQKHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELESEVLQR
VMQRGESEIRLRKQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-33 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_001744236.1 aliphatic sulfonates transport ATP-binding subunit NC_008702.1.4606598. Protein 7e-14 41