Gene Information

Name : EcSMS35_2180 (EcSMS35_2180)
Accession : YP_001744230.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : periplasmic pilus chaperone family protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2188257 - 2188931 bp
Length : 675 bp
Strand : -
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
GTGACCGTAAGTTTAACGGCAATATTACTCAGCTGTTCGTTCACATGGGCGGCAGGTAAAGGTGGGGTCGGACTTGCAGC
AACACGTCTTGTTTATTCGGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTAACACCAGTCCGGATGTTCCTTATCTGA
TTCAGTCATGGGTGATGACACCAGATAATAAAAAGTCAGCGGACTTTATTATTACACCACCGCTATTTGTGCTGAATCCG
GCAAACGAGAACCTGCTACGCATTATGTACATTGGCGCGCCGTTGGCGAAAGACAGAGAAACTCTTTTCTTCACCAGCGT
ACGGGCAGTCCCTTCAACAACGAAGCGGGAAGAAGGCAATACCCTGAAGATTGCCACACAAAGCGTCATCAAACTTTTCT
GGCGACCAAAAGGTTTAGCGTATCCCTTAGCCGAGGCTCCGGCGAAACTACGTTGCACTTCGTCAGCTGACATGGTTACG
GTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGGAAAAGTAGTTAAAAATCAAATGATTTC
CCCCTTTGATAAATACCAATTCTCTCTGCCAATGGGTGCCAAAAACAGCAGCGTAACGTACCGAACTATCAATGACTACG
GGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA

Protein sequence : 
MTVSLTAILLSCSFTWAAGKGGVGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNP
ANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLAEAPAKLRCTSSADMVT
VSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPMGAKNSSVTYRTINDYGAETPQLNCKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-38 45
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_2180 YP_001744230.1 periplasmic pilus chaperone family protein VFG0911 Protein 1e-37 45
EcSMS35_2180 YP_001744230.1 periplasmic pilus chaperone family protein VFG1644 Protein 2e-37 45
EcSMS35_2180 YP_001744230.1 periplasmic pilus chaperone family protein VFG0875 Protein 2e-38 45
EcSMS35_2180 YP_001744230.1 periplasmic pilus chaperone family protein VFG0445 Protein 1e-37 42