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Name : EcSMS35_2179 (EcSMS35_2179) Accession : YP_001744229.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : outer membrane usher protein fimD-like protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2185632 - 2188232 bp Length : 2601 bp Strand : - Note : identified by match to protein family HMM PF00577 DNA sequence : ATGTATAGAACTCAACGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGT GTCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCAGCCTTTTTCAAAGATGATCCCTCAATGGTGGCTGATT TGTCTCGTTTCGAAAAAGGGCAAAAAATAACGCCAGGGGTTTATCGAGTCGATATTGTTCTGAATCAGACAATTGTAGAT ACGCGCAACGTCAATTTTGTTGAGATAACGCCAGAGAAGGGGATTGCCGCCTGTTTGACGACTGAAAGCCTGGATGCAAT GGGCGTGAATACTGATGCGTTTCCGGCTTTTAAACAACTGGATAAACAAGCGTGTGCGCCATTGGCGGAAATTATTCCGG ATGCCAGCGTAACTTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAACGCTCGT GGTTATGTCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCATTTAGCGGGGCTAACAGTAT TCATAGCAGCGCAGGTAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGTTAATTTAGGCCCATGGAGAT TGCGCAACAATTCAACATGGAGTCGCAGTAGTGGCCAAACCGCAGAATGGAAGAATCTCAGCAGCTATTTGCAGCGGGCG GTGATTCCATTAAAAGGCGAACTGACCGTCGGTGATGATTATACGGCAGGCGATTTTTTTGATAGCGTCAGCTTTCGTGG CGTGCAGCTGGCGTCAGATGACAACATGCTGCCAGACAGCTTGAAAGGGTTTGCGCCAGTGGTGCGTGGTATCGCCAAAA GCAATGCACAGGTAACGATTAAGCAAAATGGTTACACCATCTATCAAACTTATGTTTCGCCTGGCGCTTTTGAGATTAGT GATCTCTACTCTACGTCGTCGAGTGGTGATTTGTTGGTTGAAATCAAAGAAGCTGACGGTAGTGTCAATAGTTACAGTGT GCCCTTTTCCAGCGTGCCATTACTCCAGCGTCAGGGACGCATCAAATATGCGGTGACGCTGGCGAAATACAGAACCAATA GTAATGACCAGCAAGAAAGTAAATTTGCTCAGGCCACGCTGCAATGGGGTGGGCCGAGGGGAACGACCTGGTATGGCGGA GGGCAATATGCTGAATATTACCGTGCCGCTATGTTTGGTCTGGGTTTTAACCTCGGCGATTTCGGAGCAATTTCGTTCGA CGCGACCCAGGCTAAAAGTACGCTGGCAGACCAAAGTGAACATAAAGGGCAGTCATATCGTTTTCTGTATGCCAAAACGC TCAACCAATTGGGCACCAACTTTCAATTGATGGGCTACCGCTATTCGACGTCGGGTTTCTACACCCTTTCCGACACTATG TATAAACACATGGATGGCTACGAATTTAATGACGGTGATGATGAAGATACGCCAATGTGGTCGCGTTATTACAATTTGTT TTACACAAAACGTGGCAAACTGCAGGTCAACATCTCCCAGCAATTAGGCGAGTACGGTTCGTTTTATTTAAGCGGTAGCC AGCAAACTTACTGGCATACCGATCAACAGGATCGGCTATTACAGTTTGGCTACAACACGCAAATTAAAGATCTCTCGCTG GGGGTTTCCTGGAACTACAGTAAGTCCCGTGGTCAACCTGACGCTGACCAGGTGTTTGCACTTAATTTTTCCCTGCCGCT CAATCTGTTGCTCCCCAAAAGTAATGATAGCTATACCAGGAAAAAAAATTACGCCTGGATGACCTCTAATACCAGTATCG ATAACGAAGGGCACACTACACAAAACCTGGGTTTAACGGAGACACTACTCGATGACGGTAATCTGAGCTACAGCGTGCAA CAGGGATATAACAGCGAGGGGAAAACGGCTAATGGTAGCGCCAGCATGGACTACAAAGGGGCGTTTGCAGATGCTCGAGT GGGCTACAACTACAGCGATAACGGCAGTCAACAACAACTGAACTACGCTCTTTCAGGCAGTTTAGTTGCCCATTCGCAGG GTATTACGTTGGGTCAATCATTGGGTGAAACTAATGTCCTGATTGCCGCGCCAGGCGCCGAAAATACTCGTGTGGCGAAC AGCACCGGGCTGAAAACTGACTGGCGTGGATATACCGTTGTGCCTTATGCCACTTCTTATCGGGAAAATCGAATTGCACT TGATGCGGCGTCGTTAAAACGTAACGTGGATCTTGAAAATGCCGTAGTAAACGTGGTTCCCACCAAAGGGGCATTGGTTC TGGCGGAGTTCAATGCCCATGCGGGGGCTAGGGTATTAATGAAAACATCAAAGCAGGGTATGCCGCTGAGATTTGGTGCA ATGGCAACACTGGATGGCGCACAAACAATTAGCGGTATCATTGATGATGATGGTTCGCTCTATATGTCTGGTTTGCCGGC GAAGGGAACGATAACTGTACGCTGGGGCGACGCTCCCGATCAAATTTGTCATATCAGTTACGAGCTTACCGAACAACAAA TTAACGCTGCGATTACGCGGATGGATTCAGTATGCGAATAA Protein sequence : MYRTQRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVD TRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQLDKQACAPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR GYVPPERWDEGINALLLGYSFSGANSIHSSAGSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRA VIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQVTIKQNGYTIYQTYVSPGAFEIS DLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNDQQESKFAQATLQWGGPRGTTWYGG GQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTM YKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSL GVSWNYSKSRGQPDADQVFALNFSLPLNLLLPKSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNLSYSVQ QGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVAN STGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGMPLRFGA MATLDGAQTISGIIDDDGSLYMSGLPAKGTITVRWGDAPDQICHISYELTEQQINAAITRMDSVCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 48 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 2e-180 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcSMS35_2179 | YP_001744229.1 | outer membrane usher protein fimD-like protein | VFG0876 | Protein | 0.0 | 49 |
| EcSMS35_2179 | YP_001744229.1 | outer membrane usher protein fimD-like protein | VFG0446 | Protein | 0.0 | 49 |
| EcSMS35_2179 | YP_001744229.1 | outer membrane usher protein fimD-like protein | VFG0454 | Protein | 4e-169 | 46 |
| EcSMS35_2179 | YP_001744229.1 | outer membrane usher protein fimD-like protein | VFG1645 | Protein | 0.0 | 46 |
| EcSMS35_2179 | YP_001744229.1 | outer membrane usher protein fimD-like protein | VFG0912 | Protein | 1e-180 | 45 |
