|
Name : lolD (EcSMS35_2009) Accession : YP_001744061.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Resistance Product : lipoprotein transporter ATP-binding subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : - Position : 2029190 - 2029891 bp Length : 702 bp Strand : - Note : outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone DNA sequence : ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTACTGCACAA TGTCAGTTTCAGCGTCGGCGAAGGTGAAATGATGGCGATCGTCGGTAGCTCTGGTTCCGGTAAAAGTACCTTGCTGCACC TGCTGGGCGGGCTGGATACACCAACCTCCGGCGATGTGATCTTTAACGGTCAACCGATGAGCAAACTGTCTTCGGCGGCA AAAGCAGAACTGCGCAACCAGAAGCTGGGCTTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACTGCCCTGGAAAA CGTGGCTATGCCACTGCTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCCGTGCGCTGGAGATGTTAAAAGCGGTGG GGCTGGGGCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGCGGCGAACGCCAGCGTGTGGCGATTGCCCGTGCGCTG GTCAATAACCCGCGTCTGGTACTGGCGGATGAACCTACCGGTAACCTCGATGCGCGTAACGCCGACAGCATCTTCCAGTT GCTTGGGGAATTGAATCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCC GCCAACTGGAGATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA Protein sequence : MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAA KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLGHRANHRPSELSGGERQRVAIARAL VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 7e-28 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-28 | 41 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-28 | 41 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lolD | YP_001744061.1 | lipoprotein transporter ATP-binding subunit | NC_008702.1.4606598. | Protein | 6e-37 | 48 |
| lolD | YP_001744061.1 | lipoprotein transporter ATP-binding subunit | NC_012469.1.7686878. | Protein | 3e-41 | 45 |
| lolD | YP_001744061.1 | lipoprotein transporter ATP-binding subunit | CP001581.1.gene798.p | Protein | 8e-37 | 41 |
