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Name : EcSMS35_1666 (EcSMS35_1666) Accession : YP_001743720.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : fimbrial usher family protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1659328 - 1661943 bp Length : 2616 bp Strand : + Note : identified by match to protein family HMM PF00577 DNA sequence : ATGCATCAGGTGTTACTACTGCCTCGCTTTGCACGGCTTACCATTGCCCTTGGCTTAGCAACTGCGGTATTTCCCGTTGA CGCAGAGTTTTATTTTAATCCACGGTTTTTAAGCAATGATCTTGCTGAATCTGTCGATTTATCCGCCTTTACTAAGGGAC GCGAGGCACCACCTGGTACATATCGGGTCGACATTTATTTGAACGACGAATTTATGACTAGTCGGGATATTACTTTTATT GCAGATGATAATAATGCAGATCTCATCCCATGCCTGAGTACAGACCTTCTTGTCAGTCTTGGCATAAAAAAATCAGCATT ATTAGACAATAAGGAACATTCGGCAGAAAAACATGTGTCGGACAACAGCGCATGCACACCACTTCGGGATCGTTTGGCTG ACGCATCATCTGAGTTTAATGTTGGTCAGCAACATCTATCACTCTCCGTTCCGCAAATTTATGTTGGCAGAATGGCTCGC GGCTATGTTTCTCCGGATCTGTGGGAAGAAGGAATAAATGCTGGGCTACTAAACTATAGTTTTAATGGTAATTCTATTAA TAATCGTGGCAACCATAATGCAGGAAAATCCAACTATGCATATTTGAATTTACAGAGTGGCATCAACATTGGTAGTTGGC GACTGCGCGATAACTCAACGTGGAGTTATAACAGTGGGAGTAGCAATTCATCTGACAGCAATAAATGGCAGCATATCAAT ACGTCGGCTGAACGTGACATTATTCCCTTACGCTCACGCTTAACGGTAGGTGATAGTTATACCGATGGCGATATTTTTGA TAGTGTGAACTTTCGTGGCCTCAAAATAAATTCAACAGAAGCGATGTTGCCCGATAGCCAACATGGTTTCGCTCCGGTGA TTCATGGTATTGCCCGCAGCACCGCACAAGTGAGTGTAAAACAGAATGGATACGATGTTTATCAGACTACTGTCCCACCC GGCCCTTTTACTATTGATGATATCAACTCTGCGGCCAATGGTGGTGATCTGCAAGTAACCATAAAAGAGGCAGACGGCAG TATTCAGACATTATATGTTCCTTATTCGTCTGTTCCGGTTCTCCAACGTGCTGGATATACGCGTTATGCGCTTGCCATGG GGGAATATCGTAGTGGAAATAACCTGCAAAGCTCCCCCAAGTTCATACAAGGTAGCTTGATGCATGGACTGGAAGGAAAC TGGACACCTTATGGCGGAATGCAAATTGCAGAAGATTATCAGGCCTTCAACCTTGGTATTGGTAAAGATTTAGGACTTTT TGGTGCCTTTTCTTTCGATATCACGCAGGCCAATACGACACTTGCAGATGGCACCCGTCACAGCGGGCAATCGATTAAAT CCGTCTACAGCAAATCCTTCTACCAGACGGGAACCAATATCCAGGTCGCAGGATATCGCTATTCTACGCAAGGTTTTTAT AACTTATCCGACAGTGCCTACAGTCGAATGAGTGGTTACACCGTCAAGCCTCCTACCGGAGACAGCAATGAGCAGACACA ATTTATTGATTATTTTAATCTGTTCTACAGTAAGCGTGGTCAGGAACAAATAAGCATCTCTCAGCAGCTTGGAAATTACG GTACGACATTTTTCAGTGCCAGTCGCCAAAGTTACTGGAACACGTCACGCAGCGACCAGCAAATATCATTTGGATTAAAT GTGCCGTTTAGTGATATTACGACTTCGCTGAATTACAGCTATTCCAATAATATATGGCAAAACGATCGGGATCATTTACT TGCTTTTACGCTTAATGTTCCCTTCAGTCATTGGATGCGTACAGACAGTCAGTCGGCATTTCGTAACTCAAACGCCAGTT ACAGTATGTCAAACGATTTGAAAGGCGGCATGACCAACCTATCAGGGGTTTATGGCACTCTGCTGCCGGATAATAACCTG AATTATAGTGTTCAGGTCGGTAACACCCACGGGGGTAATACATCGTCTGGCACCAGTGGTTACAGTTCTCTTAATTATCG TGGAGCTTACGGTAATACGAATATCGGTTACAGTCGGAGTGGTGACAGCAGCCAGATTTATTACGGAATGAGTGGTGGCA TTATTGCTCATGCTGATGGCATCACCTTTGGACAGCCACTGGGCGACACAATGGTTCTGGTTAAGGCTCCTGGCGCTGAT AATGTCAAAATAGAGAACCAGACCGGAATTCATACCGACTGGCGTGGCTATGCCATATTACCATTTGCGACAGAATATAG AGAAAATCGTGTCGCTCTTAACGCGAATTCCCTTGCAGATAATGTTGAACTGGATGAAACCGTAGTCACTGTCATCCCAA CTCACGGTGCTATTGCCAGAGCAACATTTAATGCACAAATCGGCGGGAAAGTATTAATGACGTTGAAGTACGGTAATAAA AGCGTTCCATTCGGTGCAATTGTCACTCACGGAGAGAATAAAAATGGCAGCATTGTCGCGGAAAATGGTCAGGTTTATCT GACTGGACTTCCACAGTCAGGGAAATTACAGGTTTCATGGGGCAATGATAAAAACTCAAACTGTATTGTCGATTACAAGC TTCCTGCAGTCTCTCCTGGAACCTTGCTGAACCAGCAGACAGCAATCTGTCGCTAA Protein sequence : MHQVLLLPRFARLTIALGLATAVFPVDAEFYFNPRFLSNDLAESVDLSAFTKGREAPPGTYRVDIYLNDEFMTSRDITFI ADDNNADLIPCLSTDLLVSLGIKKSALLDNKEHSAEKHVSDNSACTPLRDRLADASSEFNVGQQHLSLSVPQIYVGRMAR GYVSPDLWEEGINAGLLNYSFNGNSINNRGNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYNSGSSNSSDSNKWQHIN TSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQHGFAPVIHGIARSTAQVSVKQNGYDVYQTTVPP GPFTIDDINSAANGGDLQVTIKEADGSIQTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSSPKFIQGSLMHGLEGN WTPYGGMQIAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADGTRHSGQSIKSVYSKSFYQTGTNIQVAGYRYSTQGFY NLSDSAYSRMSGYTVKPPTGDSNEQTQFIDYFNLFYSKRGQEQISISQQLGNYGTTFFSASRQSYWNTSRSDQQISFGLN VPFSDITTSLNYSYSNNIWQNDRDHLLAFTLNVPFSHWMRTDSQSAFRNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNL NYSVQVGNTHGGNTSSGTSGYSSLNYRGAYGNTNIGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLGDTMVLVKAPGAD NVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETVVTVIPTHGAIARATFNAQIGGKVLMTLKYGNK SVPFGAIVTHGENKNGSIVAENGQVYLTGLPQSGKLQVSWGNDKNSNCIVDYKLPAVSPGTLLNQQTAICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 58 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcSMS35_1666 | YP_001743720.1 | fimbrial usher family protein | VFG0876 | Protein | 0.0 | 58 |
| EcSMS35_1666 | YP_001743720.1 | fimbrial usher family protein | VFG1645 | Protein | 0.0 | 54 |
| EcSMS35_1666 | YP_001743720.1 | fimbrial usher family protein | VFG0912 | Protein | 0.0 | 54 |
| EcSMS35_1666 | YP_001743720.1 | fimbrial usher family protein | VFG0446 | Protein | 1e-160 | 43 |
