Gene Information

Name : EcSMS35_1665 (EcSMS35_1665)
Accession : YP_001743719.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : periplasmic pilus chaperone family protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1658540 - 1659250 bp
Length : 711 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGCAAACTACGCGTATCCCCTACTCTATTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTGCCATAGCAC
CATTGCCAACGCAGCTGTCGCACTTGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTATTGCCTGTCA
CGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCAGGTGACCAAAAAGACACCCAGTTTGTC
ATTACCCCACCGCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTTCGGATAATCAACGCCACTAATCATCAGTTACC
AGGCGACCGTGAAAGCCTGTTTTGGGTTAATGTTAAAGCTATTCCTGCTATGGAAAAAGACCAGAAGAATGAGAATACAT
TACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGCCCGACGAACCTGGCAATGGCACCTGAAGAAGCGCCAGCA
ATGCTTCGGTTTCGTCGCAGCGGTAGCAAACTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAACAAATATGAA
AGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTATCGGTGGATATCCCGCATGCTGCAACCG
GGGATATCAGTTTTCAGACGATCAATGATTACGGTGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MQTTRIPYSISFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFV
ITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTNLAMAPEEAPA
MLRFRRSGSKLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAATGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-66 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_1665 YP_001743719.1 periplasmic pilus chaperone family protein VFG0911 Protein 1e-66 64
EcSMS35_1665 YP_001743719.1 periplasmic pilus chaperone family protein VFG1644 Protein 2e-66 64
EcSMS35_1665 YP_001743719.1 periplasmic pilus chaperone family protein VFG0875 Protein 3e-70 61
EcSMS35_1665 YP_001743719.1 periplasmic pilus chaperone family protein VFG0445 Protein 3e-58 49