|
Name : EcSMS35_0142 (EcSMS35_0142) Accession : YP_001742259.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Unknown Product : ISNCY family transposase Function : - COG functional category : S : Function unknown COG ID : COG5464 EC number : - Position : 157021 - 157941 bp Length : 921 bp Strand : + Note : yadD; identified by match to protein family HMM PF04754; match to protein family HMM TIGR01784 DNA sequence : ATGGATGCACCGAGTACCACACCGCATGATGCGGTGTTTAAACAATTTTTAATGCATGCGGAAACGGCTCGTGACTTTCT GGATATCCATTTGCCAGCGGAACTACGCGAACTGTGTGACCTCGACACGCTGCATCTTGAGTCGGGGAGTTTTATTGAAG AAAGCCTGAAAGGGCACAGCACTGACGTGCTCTATTCCGTGCAAATGCAGGGTAATACGGGCTATCTACATGTTGTAATT GAACACCAAAGCAAGCCGGACAAAAAAATGGCCTTTCGCATGATGCGTTATTCTATTGCTGCCATGCACCGGCATCTGGA GGCAGATCACGATAAGCTGCCGCTGGTGGTGCCGATTTTGTTTTATCAGGGCGAGGCCACGCCTTATCCACTCTCAATGT GCTGGTTTGATATGTTTTACTCGCCGGAGCTGGCGCGACGCGTCTATAACAGTCCTTTCCCGCTGGTGGATATCACTATC ACACCGGATGACGAAATCATGCAACATCGGCGGATTGCGATTCTCGAACTGCTGCAAAAACATATTCGCCAACGCGACTT AATGTTATTGCTGGAGCAACTGGTCACGCTGATAGACGAAGGGTACACTAGCGGAAGTCAGTTAGTTGCCATGCAAAACT ATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTATGGTGTGCTGAGAGACAGGGAAACGGGAGGGGAGTCT ATGATGACGCTGGCGCAGTGGTTTGAAGAGAAGGGAAGACAGGAGGAAAGGCAGGAGGTAAGACAGGAGGTAATACAAGA GGTTAGACAGGAAGTAAGACAGGAATTCGCCCTGCGTTTTCTGAGTAAAGGGATGTCTCGGGAAGACGTTGCAGAGATGG CAAATTTACCTCTTGCTGAGGTTGATAAGCTGATTAGCTAA Protein sequence : MDAPSTTPHDAVFKQFLMHAETARDFLDIHLPAELRELCDLDTLHLESGSFIEESLKGHSTDVLYSVQMQGNTGYLHVVI EHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES MMTLAQWFEEKGRQEERQEVRQEVIQEVRQEVRQEFALRFLSKGMSREDVAEMANLPLAEVDKLIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YpsIP31758_3726 | YP_001402680.1 | transposase | Not tested | YAPI | Protein | 3e-71 | 57 |
| tnp | AAN64216.1 | transposase | Not tested | necrotizing factor locus | Protein | 6e-69 | 56 |
| pilW | CAF28495.1 | putative transposase | Not tested | YAPI | Protein | 5e-72 | 52 |
| YE3497 | YP_001007658.1 | putative transposase | Not tested | YAPI | Protein | 2e-70 | 51 |
| PMI2627 | YP_002152329.1 | transposase | Not tested | Not named | Protein | 1e-52 | 46 |
