Gene Information

Name : EcSMS35_1114 (EcSMS35_1114)
Accession : YP_001743186.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Unknown
Product : anaerobic C4-dicarboxylate transporter
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG3069
EC number : -
Position : 1128517 - 1129878 bp
Length : 1362 bp
Strand : -
Note : identified by similarity to SP:P0ABP3; match to protein family HMM PF03606; match to protein family HMM PF06808; match to protein family HMM TIGR00771

DNA sequence :
ATGATTAAAGTTGTTATCGCGCTTCTTGTTATCGTGATAGTTGCTCGCTTAATCCTGAAAGGATATCGTGCAGAACCCGT
GCTTTTTATTGCCGGGCTTGCGCTGATGGTTTGTACCTGGTTTACCGGTTGGGGCACAGTGTTACCGAAGGGCGTGTCCG
GTACAGGAATTAGTTTTCTTGATCCTTTCGAAGTCATGCGCAATTTATTCAGTACCCGTGCGGCTGATCTCGGTCTGATG
ATTATGACCCTGATGGGATTTGCGCATTACATGGACCATATCGGTGCGAATGAAGCGGTTGTCCGTGTGGTAACCCGGCC
ATTACGGACATTACGTTCCCCCTATGTTCTGCTTTTTTTCTCTTATCTTTTCGCCAGTCTTCTTCAACTGGCTATCCCCT
CAGCTACCGGACTTGCTGTTTTACTGATGGGAACCATGTTTCCTATTATGCTCGGACTCGGGCTGTCAGCAGCGTCTGCC
GCAGGGGTAATTGCCACCTCTCTTGGTGTGGCGTACACACCGACAGCCATTGACGCCATACGAGGCTCTGAAGCGGTAAA
TATGGATGTGGTGGAGTATGTTGTCTATCATCAGGGGCCTGCTGCTCTGGCGACTGTTCTGATTGTCGGTATCAGCCACT
TTTTCTGGCAGAAACACTGTGATCGTAAAGCTGGAACATTACCTCATGAAATTGGTACGACAACGGTCATAAAAGCAGGC
AGTACGCCGGCTTATTATGCTCTGCTACCTATGCTACCGATCCTGATGGCCGTTGGCTCATCGGAGATTTTTGTCACCGG
AATTAATCTCAATATCATTACGATTGTTCTTATCTCAATGGCAATTTGCATGCTGATCGAATGGGTCCGTAAATGTGATC
TGAAAGCTGTATGTGACGGGTTTACCCATTTCCTGAAAGGAATGGGGACAGCATTTACCGGCGTGGTGGGCTTACTGGTG
GCCGCAGGTGTGTTTGCTCATGGGATTAAAAGCATTGGCGCGATAGATCAATTAATTTTGATGGCAGAGCACGTTGGGTT
ACCCCCTTTTGCGATGGGCATCGTTTTTGCTCTGGTTACACTGGCTGCAGCTGTCATTATGGGATCGGGCAATGCGCCAT
TTCTGGCTTTTGTTGAACTGATACCACAAATCGCTGCCAGCATGGGCGTGAATGCCATATCGATGATCCTGCCTATGCAG
CAGGCTTCCCATATGGGGCGTGCGATGTCTCCCGTATCTGGCGTGGTTATAGCGGTTTCCAGTGGAGCAAATATAACTCC
CTTCGAAGTGGTAAAACGCACTGCTTTACCCCTGATAGTTGGTTTTGTTTTTCACTCTGCGATTATCGGTATTTTTTATT
AA

Protein sequence :
MIKVVIALLVIVIVARLILKGYRAEPVLFIAGLALMVCTWFTGWGTVLPKGVSGTGISFLDPFEVMRNLFSTRAADLGLM
IMTLMGFAHYMDHIGANEAVVRVVTRPLRTLRSPYVLLFFSYLFASLLQLAIPSATGLAVLLMGTMFPIMLGLGLSAASA
AGVIATSLGVAYTPTAIDAIRGSEAVNMDVVEYVVYHQGPAALATVLIVGISHFFWQKHCDRKAGTLPHEIGTTTVIKAG
STPAYYALLPMLPILMAVGSSEIFVTGINLNIITIVLISMAICMLIEWVRKCDLKAVCDGFTHFLKGMGTAFTGVVGLLV
AAGVFAHGIKSIGAIDQLILMAEHVGLPPFAMGIVFALVTLAAAVIMGSGNAPFLAFVELIPQIAASMGVNAISMILPMQ
QASHMGRAMSPVSGVVIAVSSGANITPFEVVKRTALPLIVGFVFHSAIIGIFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAQ07475.1 DcuC-like protein Not tested Not named Protein 7e-36 44