Gene Information

Name : EcSMS35_1061 (EcSMS35_1061)
Accession : YP_001743140.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1075620 - 1075841 bp
Length : 222 bp
Strand : -
Note : identified by match to protein family HMM PF06174

DNA sequence :
ATGAAAATTATCACCCGTGGCGAAGCCATGCGTATTCACCGTCAGCATCCGGCATCCCGTCTTTTTTCGTTCTGTACCGG
CAAATACCGCTGGCACGGCAGTGCTGAGGTTTATACCGGTCGTGAAGTGCAGGATATTCCCGGTGTGCTGGCCGTGTTTG
CCGAACGCCGTAAGGACAGTTTTGGTCCGTATGTCCGGCTGATGAGCGTCACCCTGAACTGA

Protein sequence :
MKIITRGEAMRIHRQHPASRLFSFCTGKYRWHGSAEVYTGREVQDIPGVLAVFAERRKDSFGPYVRLMSVTLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeT CAE85202.1 YeeT protein Not tested PAI V 536 Protein 2e-30 98
unnamed CAD66204.1 hypothetical protein Not tested PAI III 536 Protein 2e-30 96
c5151 NP_756999.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-30 95
yeeT NP_838485.1 hypothetical protein Not tested SHI-1 Protein 4e-30 95
yeeT CAD33788.1 YeeT protein Not tested PAI I 536 Protein 6e-30 95
yeeT NP_708771.1 hypothetical protein Not tested SHI-1 Protein 4e-30 95
yeeT AAZ04459.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-30 95
unnamed AAL67344.1 intergenic-region protein Not tested PAI II CFT073 Protein 6e-30 95
aec74 AAW51757.1 Aec74 Not tested AGI-3 Protein 4e-30 95
yeeT CAD42099.1 hypothetical protein Not tested PAI II 536 Protein 3e-30 95
unnamed AAL08476.1 unknown Not tested SRL Protein 9e-30 95
Z1218 NP_286753.1 hypothetical protein Not tested TAI Protein 1e-29 95
yeeT ADD91701.1 YeeT Not tested PAI-I AL862 Protein 7e-30 94
yeeT AAK16199.1 YeeT Not tested PAI-I AL862 Protein 6e-30 94
unnamed AAK00480.1 unknown Not tested SHI-1 Protein 4e-26 94
unnamed CAI43847.1 hypothetical protein Not tested LEE Protein 1e-29 94
ECO103_3590 YP_003223447.1 hypothetical protein Not tested LEE Protein 4e-29 94
unnamed AAL57578.1 unknown Not tested LEE Protein 2e-27 91
unnamed CAI43902.1 hypothetical protein Not tested LEE Protein 2e-27 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_1061 YP_001743140.1 hypothetical protein VFG1679 Protein 1e-30 96
EcSMS35_1061 YP_001743140.1 hypothetical protein VFG1067 Protein 4e-30 95
EcSMS35_1061 YP_001743140.1 hypothetical protein VFG1618 Protein 1e-30 95
EcSMS35_1061 YP_001743140.1 hypothetical protein VFG1529 Protein 2e-30 95
EcSMS35_1061 YP_001743140.1 hypothetical protein VFG0661 Protein 1e-30 95