Gene Information

Name : EcSMS35_1060 (EcSMS35_1060)
Accession : YP_001743139.1
Strain : Escherichia coli SMS-3-5
Genome accession: NC_010498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1075178 - 1075444 bp
Length : 267 bp
Strand : -
Note : identified by match to protein family HMM PF06154

DNA sequence :
GTGCAGGAGGGTAACCGCCTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCTGTTCAGCGATGCAGATGCGTACCA
CCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGTGAACTGAATCCCCGCCATCAGC
ATACCGTCACGCTGTATGCAAAAGGGCTGACCTGCAAAGCCGATACCCTCAGCAGTTGTGGTTACGTTTATCTGGCTGTT
TATCCGACGCCCGAAATGAAAAATTAA

Protein sequence :
MQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKADTLSSCGYVYLAV
YPTPEMKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 1e-36 99
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 2e-34 95
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-34 94
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 3e-34 91
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 9e-34 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_1060 YP_001743139.1 hypothetical protein VFG1681 Protein 7e-35 95
EcSMS35_1060 YP_001743139.1 hypothetical protein VFG1619 Protein 4e-34 91