|
Name : ugd (EcSMS35_1032) Accession : YP_001743111.1 Strain : Escherichia coli SMS-3-5 Genome accession: NC_010498 Putative virulence/resistance : Virulence Product : UDP-glucose 6-dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 1053487 - 1054653 bp Length : 1167 bp Strand : + Note : identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 DNA sequence : ATGAAAATCACCATTTCCGGTACTGGCTATGTCGGCTTGTCAAACGGGCTTCTAATCGCACAAAATCATGAGGTTGTGGC ATTAGATATTTTACCGTCACGCGTTGCTATGCTGAATGATCGGATATCTCCTATTGTTGATAAGGAAATTCAGCAGTTTT TGCAATCAGATAAAATACACTTTAATGCCACATTAGATAAAAATGAAGCCTACCGGGATGCTGATTATGTCATCATCGCC ACTCCAACCGACTATGATCCTAAAACTAATTATTTCAATACATCCAGTGTAGAATCAGTAATTAAAGACGTAGTTGAGAT AAATCCTTATGCGGTTATGGTGATCAAATCAACGGTTCCCGTTGGTTTTACCGCAGCGATGCATAAGAAATATCGCACTG AAAATATTATATTCTCCCCGGAATTTCTCCGTGAGGGTAAAGCCCTTTACGATAATCTCCATCCTTCACGTATTGTCATC GGTGAGCGTTCAGAACGCGCAGAACGTTTTGCTGCTCTGTTACAGGAAGGAGCGATTAAGCAAAATATCCCGACCCTGTT TACCGACTCCACTGAAGCAGAAGCGATTAAACTTTTTGCAAACACCTACCTGGCGATGCGCGTGGCGTACTTTAACGAAC TGGATAGCTATGCAGAAAGTTTAGGTCTGAATACTCGCCAGATTATCGAAGGCGTTTGTCTCGATCCGCGTATTGGCAAC CATTACAACAACCCGTCGTTTGGCTATGGTGGTTATTGTCTGCCGAAAGATACCAAGCAGTTACTGGCGAACTACCAGTC TGTGCCGAATAACCTGATCTCGGCAATTGTCGATGCTAACCGCACACGTAAAGACTTTATTGCCGATGCCATTTTGTCAC GCAAACCGCAAGTGGTGGGTATTTATCGTCTGATTATGAAGAGCGGGTCAGATAACTTCCGTGCGTCTTCCATTCAGGGG ATTATGAAACGTATCAAGGCGAAAGGCGTTGAAGTGATCATCTACGAACCGGTGATGAAAGAAGATTCATTCTTCAACTC TCGCCTGGAACGTGATCTCGCCACTTTCAAACAACAAGCCGATGTCATTATTTCCAACCGTATGGCAGAAGAGCTTAAAG ATGTGGCAGATAAGGTCTACACCCGCGATCTCTTTGGCAGCGACTAA Protein sequence : MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVI GERSERAERFAALLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADAILSRKPQVVGIYRLIMKSGSDNFRASSIQG IMKRIKAKGVEVIIYEPVMKEDSFFNSRLERDLATFKQQADVIISNRMAEELKDVADKVYTRDLFGSD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0068 | YP_300158.1 | UDP-glucose 6-dehydrogenase | Not tested | SCC15305cap | Protein | 8e-93 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ugd | YP_001743111.1 | UDP-glucose 6-dehydrogenase | VFG0963 | Protein | 3e-102 | 55 |
