Gene Information

Name : EcSMS35_A0055 (EcSMS35_A0055)
Accession : YP_001739943.1
Strain :
Genome accession: NC_010488
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 43915 - 44148 bp
Length : 234 bp
Strand : -
Note : identified by similarity to SP:Q5QJF4; match to protein family HMM PF06006

DNA sequence :
ATGAGCGAATATTTCAGAATACTTCAGGGACTGCCGGACGGTCCTTTTACCCGCAAACAGGCCGAAGCCGTTGCCGCACA
GTACCGGAATGTCTTTATCGAGGATGATCAGGGAACACATTTTCGCCTGGTTGTCCGTCAGGATGGCACGTTGATCTGGC
GCTCCTGGAATTTTGAGGACTGTGCCGGGTACTGGATGAACCGGTACATCAGGGATTTCGGGATTCTTAAGTAA

Protein sequence :
MSEYFRILQGLPDGPFTRKQAEAVAAQYRNVFIEDDQGTHFRLVVRQDGTLIWRSWNFEDCAGYWMNRYIRDFGILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ykfF CAE85198.1 YkfF protein Not tested PAI V 536 Protein 2e-13 61
unnamed CAD33784.1 hypothetical protein Not tested PAI I 536 Protein 4e-15 58
ORF_46 AAZ04455.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-15 58
c5157 NP_757005.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-14 57
unnamed CAI43842.1 hypothetical protein Not tested LEE Protein 6e-06 52
aec70 AAW51753.1 Aec70 Not tested AGI-3 Protein 6e-06 52
ykfF ADD91705.1 YkfF Not tested PAI-I AL862 Protein 6e-06 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcSMS35_A0055 YP_001739943.1 hypothetical protein VFG1525 Protein 1e-15 58