Gene Information

Name : strA (EcSMS35_A0128)
Accession : YP_001740010.1
Strain :
Genome accession: NC_010488
Putative virulence/resistance : Resistance
Product : aminoglycoside resistance protein A
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG3231
EC number : -
Position : 98629 - 99432 bp
Length : 804 bp
Strand : +
Note : identified by match to protein family HMM PF01636

DNA sequence :
TTGAATCGAACTAATATTTTTTTTGGTAAATCGCATTCTGACTGGTTGCCTGTCAGAGGCGGAGAATCTGGTGATTTTGT
TTTTCGACGTGGTGACGGGCATGCCTTCGCGAAAATCGCACCTGCTTCCCGCCGCGGTGAGCTCGCTGGAGAGCGTGACC
GCCTCATTTGGCTCAAAGGTCGAGGTGTGGCTTGCCCCGAGGTCATCAACTGGCAGGAGGAACAGGAGGGTGCATGCTTG
GTGATAACGGCAATTCCGGGAGTACCGGCGGCTGATCTGTCTGGAGCGGATTTGCTCAAAGCGTGGCCGTCAATGGGGCA
GCAACTTGGCGCTGTTCACAGCCTATCGGTTGATCAATGTCCGTTTGAGCGCAGGCTGTCGCGAATGTTCGGACGCGCCG
TTGATGTGGTGTCCCGCAATGCCGTCAATCCCGACTTCTTACCGGACGAGGACAAGAGTACGCCGCAGCTCGATCTTTTG
GCTCGTGTCGAACGAGAGCTACCGGTGCGGCTCGACCAAGAGCGCACCGATATGGTTGTTTGCCATGGTGATCCCTGCAT
GCCGAACTTCATGGTGGACCCTAAAACTCTTCAATGCACGGGTCTGATCGACCTTGGGCGGCTCGGAACAGCAGATCGCT
ATGCCGATTTGGCACTCATGATTGCTAACGCCGAAGAGAACTGGGCAGCGCCAGATGAAGCAGAGCGCGCCTTCGCTGTC
CTATTCAATGTATTGGGGATCGAAGCCCCCGACCGCGAACGCCTTGCCTTCTATCTGCGATTGGACCCTCTGACTTGGGG
TTGA

Protein sequence :
MNRTNIFFGKSHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASRRGELAGERDRLIWLKGRGVACPEVINWQEEQEGACL
VITAIPGVPAADLSGADLLKAWPSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLALMIANAEENWAAPDEAERAFAV
LFNVLGIEAPDRERLAFYLRLDPLTWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
strA AFH57207.1 streptomycin resistance protein Not tested AbaR4a Protein 8e-122 99
strA AGK07031.1 StrA streptomycin phosphotransferase Not tested SGI1 Protein 8e-122 99
strA AGK07089.1 StrA streptomycin phosphotransferase Not tested SGI1 Protein 8e-122 99
strA YP_001800932.1 aminoglycoside-3''-phosphotransferase Not tested Not named Protein 1e-121 99
strA AFV47972.1 streptomycin (3') phosphotransferase StrA Not tested AbaR25 Protein 8e-122 99
strA AEQ20909.1 StrA, APH(3')-Ib streptomycin(3') phosphotransferase Not tested Tn6166 Protein 1e-121 99
strA AFV48000.1 streptomycin (3') phosphotransferase StrA Not tested delta-AbaR25 Protein 8e-122 99
strA AEZ06049.1 StrA, APH(3')-Ib, streptomycin(3') phosphotransferase Not tested Tn6167 Protein 1e-121 99
strA YP_005176180.1 aminoglycoside 3''-phosphotransferase protein Not tested ICEPmu1 Protein 2e-114 99
strA ACK44539.1 StrA Not tested SGI1 Protein 8e-122 99
strA AEA34675.1 aminoglycoside phosphotransferase Not tested Not named Protein 8e-122 99
BJAB07104_00282 YP_008207747.1 Aminoglycoside phosphotransferase Not tested AbaR25 Protein 1e-121 99
ABZJ_00266 YP_005524222.1 hypothetical protein Not tested AbaR22 Protein 1e-121 99
BJAB0868_00286 YP_008211612.1 Aminoglycoside phosphotransferase Not tested AbaR26 Protein 5e-121 99
ABK1_0266 YP_005512838.1 StrA Not tested AbaR4d Protein 1e-121 99
ABK1_0258 YP_005512830.1 StrA Not tested AbaR4d Protein 2e-121 99
strA CAJ77025.1 Streptomycin phosphotransferase A Not tested AbaR1 Protein 7e-120 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
strA YP_001740010.1 aminoglycoside resistance protein A AF024602.1.gene5.p01 Protein 5e-122 99
strA YP_001740010.1 aminoglycoside resistance protein A DQ336355.1.orf1.gene Protein 4e-49 49