Gene Information

Name : TRQ2_0223 (TRQ2_0223)
Accession : YP_001738266.1
Strain : Thermotoga sp. RQ2
Genome accession: NC_010483
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 218388 - 219065 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0705 ABC transporter, ATP-binding protein

DNA sequence : 
TTGATCGAGGTTCACAATCTGTGGAAGGAATACAATGGGAAAGAGAAAGTAACAGCCTTGAAGGGTATAAATCTAAGAAT
AAACACGGGAGAGTTTGTTGTGATACTGGGCCCCTCCGGTTCTGGAAAGACAACGCTTCTGAATTGTCTTTCTGGTGTGG
ATCGCCCTACAAGGGGAACTGTGATAATCCATGGAACAGACCTGTACACGCTCTCAGAAGAGGAAAGAACGAGGTTCAGA
GCGGAAAACATGGGGTTTGTGTTCCAGTTCTTCAATCTCGTTCCTGTCCTCACCGCCATTGAAAATGTGGAACTACCTCT
GCTCATTCTGGGTGTGAACAGAAAAGAGGCAAGAGAACGAGCCTTCGAAATCTTGAGGAAAGTGGGGCTGGCTCACAAGT
GCGACAGGTTCCCCGAAGAACTCTCCGGAGGGGAAAAACAGCGTGTCGCCATCGCGAGGGCCATCGTCCACAATCCAAAA
GTCATATGGGCAGATGAACCCACCGGTGCTCTGGACAACGAGACGGGGAGAATGATCATAGATCTTCTGATGGAAATGAA
GGAGAATTCCACACTGGTGGTCGTGACTCACGATGAAAGAATAGCAGAGAAAGCGGACCGGGTTATAAGAATAAGAGACG
GTCAAATAGAACAGGATATATGTGAAAAAGCGTTGTAA

Protein sequence : 
MIEVHNLWKEYNGKEKVTALKGINLRINTGEFVVILGPSGSGKTTLLNCLSGVDRPTRGTVIIHGTDLYTLSEEERTRFR
AENMGFVFQFFNLVPVLTAIENVELPLLILGVNRKEARERAFEILRKVGLAHKCDRFPEELSGGEKQRVAIARAIVHNPK
VIWADEPTGALDNETGRMIIDLLMEMKENSTLVVVTHDERIAEKADRVIRIRDGQIEQDICEKAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TRQ2_0223 YP_001738266.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-44 49
TRQ2_0223 YP_001738266.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-38 46
TRQ2_0223 YP_001738266.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-38 46
TRQ2_0223 YP_001738266.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-37 44
TRQ2_0223 YP_001738266.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-37 42
TRQ2_0223 YP_001738266.1 ABC transporter-like protein NC_012469.1.7686946. Protein 3e-23 41