Gene Information

Name : SYNPCC7002_A0910 (SYNPCC7002_A0910)
Accession : YP_001734170.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 942959 - 943672 bp
Length : 714 bp
Strand : +
Note : similar to all0439 of Nostoc sp. PCC 7120

DNA sequence :
ATGATCGAAATTCATAATCTCTCCAAGATTTACGGCCAAGGGGACACCCAAATCTATGCCCTCAAACAGGTAGAACTCAG
CATCCAAGCGGGGGAATATTGCGCCATTATGGGGGCGTCAGGTTCCGGCAAATCAACCCTGATGAACATCATTGGTTGCC
TCGATCAGCCCACCAGTGGCGATTATTTCCTCGATGGCCAAAATGTCGCCACCCTCAGCGATCGCCAACTGGCCACCATT
CGGAATCGCAATATTGGTTTTGTTTTCCAGCAATTTCATCTCTTGCCCCAGATGAGTGCCCTTGAAAATGTGATTTTGCC
GATGGTTTATGGCAATGTTCCTCCCAACGAACGGCGAGACCGGGCCGTCGCCGCTCTAACCAAAGTCGGTTTGGGCAGTC
GTCTCTATAATCGTCCCAACCAACTCTCTGGGGGACAACAACAACGGGTGGCGATCGCCAGGGCGATTGTAAATAAACCC
TTACTACTGCTGGCGGACGAACCCACCGGGGCTTTAGATTCCCGAACTACCCAAGAAATCTTAGCGTTATTTCAGACCCT
CCACGACGACGGCATGAGCGTGGTGATGGTTACCCACGAAACGGAAGTGGCCCGGCAAACCAAGCGGATTATCTGGCTCC
GGGATGGCAGTATTACCCACCCAAACCTCAGTCCTGCGGAAATGATCCAAGTGGCCTTAGCCCCAAGCCCCTAA

Protein sequence :
MIEIHNLSKIYGQGDTQIYALKQVELSIQAGEYCAIMGASGSGKSTLMNIIGCLDQPTSGDYFLDGQNVATLSDRQLATI
RNRNIGFVFQQFHLLPQMSALENVILPMVYGNVPPNERRDRAVAALTKVGLGSRLYNRPNQLSGGQQQRVAIARAIVNKP
LLLLADEPTGALDSRTTQEILALFQTLHDDGMSVVMVTHETEVARQTKRIIWLRDGSITHPNLSPAEMIQVALAPSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-33 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_A0910 YP_001734170.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-57 53
SYNPCC7002_A0910 YP_001734170.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-49 47
SYNPCC7002_A0910 YP_001734170.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-42 43
SYNPCC7002_A0910 YP_001734170.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-33 42