Gene Information

Name : SYNPCC7002_A2017 (SYNPCC7002_A2017)
Accession : YP_001735259.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Resistance
Product : acetyltransferase family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 2096322 - 2096954 bp
Length : 633 bp
Strand : +
Note : similar to sll1900 of Synechocystis sp. PCC 6803

DNA sequence : 
GTGTATGGAGCCGACCCCAATGATCCGCATCCCATGGCAGGATTTCCGCAGATTTGTTTTATCCGCAACACGGTGACAAA
TCCGAATATCATCATCGGCGATTACACTTACTACGACGATCCGGAGGATTCAGAAAACTTTGAACGCAATGTTTTGTATC
ACTTTCCCTTTATTGGCGATCGCCTAATCATCGGTAAATTTTGCGCTCTGGCCAGGGGAGTTAAGTTCATCATGAACGGG
GGCAACCACAAAATCGATGGTTTTTCCACCTATCCGTTTCAGATTTTTGGCAATGGTTGGGACAAACTCGCCCTGCAACC
TAGTGACTTCCCCTACAAAGGCGATACAGTCATCGGCAATGATGTTTGGATTGGCTATGAAGCCGTGATTATGCCCGGTG
TGCACGTGGGAGATGGTGCGATTATTGCCGCCAAATCAGTCGTGGTTAACGATGTCCCTCCCTACACCATTGTAGGTGGC
AACCCCGCCAAATGTATTCGACAACGCTTTACCGATGAAGTGATTAAAACCTTACTATCAGTGGCTTGGTGGGATTGGGA
GATCGAGAAAATTACCCGCAATTTAGAAAAAATTGTCGCAGCGGATTTAGATGCTCTGCTCCAGTGTGAATAA

Protein sequence : 
MYGADPNDPHPMAGFPQICFIRNTVTNPNIIIGDYTYYDDPEDSENFERNVLYHFPFIGDRLIIGKFCALARGVKFIMNG
GNHKIDGFSTYPFQIFGNGWDKLALQPSDFPYKGDTVIGNDVWIGYEAVIMPGVHVGDGAIIAAKSVVVNDVPPYTIVGG
NPAKCIRQRFTDEVIKTLLSVAWWDWEIEKITRNLEKIVAADLDALLQCE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-29 43
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-29 43
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 4e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_A2017 YP_001735259.1 acetyltransferase family protein AM180355.1.gene2499. Protein 2e-45 50
SYNPCC7002_A2017 YP_001735259.1 acetyltransferase family protein JF268688.1.gene6.p01 Protein 5e-30 44
SYNPCC7002_A2017 YP_001735259.1 acetyltransferase family protein AY740681.1.gene5.p01 Protein 7e-30 43
SYNPCC7002_A2017 YP_001735259.1 acetyltransferase family protein AF322577.2.gene4.p01 Protein 7e-30 43
SYNPCC7002_A2017 YP_001735259.1 acetyltransferase family protein NC_002516.2.878374.p Protein 9e-30 43
SYNPCC7002_A2017 YP_001735259.1 acetyltransferase family protein AY123251.gene2.p01 Protein 1e-28 42