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Name : ureC (SYNPCC7002_A0193) Accession : YP_001733462.1 Strain : Synechococcus sp. PCC 7002 Genome accession: NC_010475 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : - Position : 203001 - 204710 bp Length : 1710 bp Strand : - Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alp DNA sequence : ATGAGTTACCGGATGTCGCGCCGTGCCTATGCAGAAACCTATGGCCCCACGGTGGGCGATCGCCTGCGTTTAGCAGATAC GGAACTGTGGCTGGAAGTGGAACAGGATTTCACCACCTATGGGGACGAGGTGAAATTTGGTGGCGGGAAGGTGATCCGCG ATGGCATGGGACAGTCCGCCGTTCCCCGTGCTGATGGGGCGGTAGATACGGTGATTACCAATGCGCTGATCGTCGACTGG TGGGGCATCGTCAAGGCCGATGTCGGTATCAAAGACGGCAAAATTTACAAAATCGGCAAAGCTGGCAACCCTGACATCCA AGACAATATCGACATTATTATTGGCCCCGGCACGGAGGCGATCGCCGGTGAAGGACATATTCTCACTGCTGGGGGCATCG ATAGCCATGTGCATTTTATTTGCCCCCAGCAAATCGAGGTGGCGATCGCCTCTGGGATTACCACAATGATCGGCGGCGGC ACTGGCCCCGCCACCGGTACCAACGCGACCACTTGCACCCCTGGGGAATGGCACATTTCTCGGATGCTCGAAGCCGCAGA AGGATTTCCAATAAATTTGGGATTTACAGGGAAGGGCAATAGCGCCAAACCAGAAGGACTGATTGAACAAGTCAGAGCTG GGGTGATCGGCCTCAAACTCCACGAAGACTGGGGTACAACCCCTGCCGCTATCGACAATTGCCTTTCTGTCGCCGATCAG TTTGATGTGCAAGTCGCAATTCACACCGACACCCTAAACGAAGCAGGTTTTGTGGAAGATACGATCGCCGCCTTTAAAAA TCGTGTCATCCACACCTACCACACCGAGGGGGCTGGGGGCGGCCACGCACCGGACATTATCAAAGTTTGTGGTGAAGCGA ATGTGCTGCCGTCTTCAACAAACCCGACCCGTCCCTACACCCTCAACACCCTAGAAGAACACCTGGATATGTTGATGGTT TGCCATCACCTCGATCGCAGTATCCTCGAAGATGTCGCCTTTGCCGAGTCGCGCATCCGTCGGGAAACCATTGCCGCCGA AGATATTTTGCATGACCTGGGAGCCTTTAGCATGATTTCCTCAGATTCCCAGGCCATGGGGCGCGTTGGGGAAACAATTA TTCGCACCTGGCAGACGGCCCACAAGATGAAAGTTCAACGGGGCGCTCTGGCCCAGGACACTGGGGAGAACGATAATTTT CGCATTAAACGCTACGTTGCCAAATACACAATTAACCCAGCGATCACCCACGGCATTTCCAATTACGTCGGCTCCATTGA GGAAGGAAAATACGCCGATCTCTGTCTCTGGAAACCCGCTTTCTTTGGGGTCAAACCAGAACTGGTGATCAAAGGGGGGG CGATCGCCTATGCCCAGATGGGAGATCCCAATGCCAGCATCCCGACGCCGCAACCAATCCACATGCGACCAATGTTCGCC AATTTTGGGAAATCAATGCAATCTACCGCCTTCACCTTTGTTTCCCAAGCAGCCATGGAAGCGGATGTGGCGACGCGATT GGGTCTCCAGAGAACCGTTTTACCCGTTGCCAACTGCCGTAACCTGACGAAGCGCGATCTGAAGTTGAATGATTACTTGC CTAGAATGGAGGTAGATCCCGAAACCTACCATGTGCGGGCCGATGGGGAAATGCTCGTCTGTGAACCGGCCACTGTTTTA CCTATGGCCCAACGTTACTTTTTATTTTAA Protein sequence : MSYRMSRRAYAETYGPTVGDRLRLADTELWLEVEQDFTTYGDEVKFGGGKVIRDGMGQSAVPRADGAVDTVITNALIVDW WGIVKADVGIKDGKIYKIGKAGNPDIQDNIDIIIGPGTEAIAGEGHILTAGGIDSHVHFICPQQIEVAIASGITTMIGGG TGPATGTNATTCTPGEWHISRMLEAAEGFPINLGFTGKGNSAKPEGLIEQVRAGVIGLKLHEDWGTTPAAIDNCLSVADQ FDVQVAIHTDTLNEAGFVEDTIAAFKNRVIHTYHTEGAGGGHAPDIIKVCGEANVLPSSTNPTRPYTLNTLEEHLDMLMV CHHLDRSILEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGETIIRTWQTAHKMKVQRGALAQDTGENDNF RIKRYVAKYTINPAITHGISNYVGSIEEGKYADLCLWKPAFFGVKPELVIKGGAIAYAQMGDPNASIPTPQPIHMRPMFA NFGKSMQSTAFTFVSQAAMEADVATRLGLQRTVLPVANCRNLTKRDLKLNDYLPRMEVDPETYHVRADGEMLVCEPATVL PMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 3e-165 | 67 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 3e-165 | 67 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 5e-152 | 64 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-153 | 64 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-153 | 64 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-153 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_001733462.1 | urease subunit alpha | VFG0270 | Protein | 1e-151 | 64 |
