Gene Information

Name : SYNPCC7002_A1735 (SYNPCC7002_A1735)
Accession : YP_001734980.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1821686 - 1822663 bp
Length : 978 bp
Strand : -
Note : similar to sll1598 of Synechocystis sp. PCC 6803

DNA sequence : 
ATGATTCGGATAAACTTACCGCGTCAAACCCTCAGCCTAGTCGGTATTGTCTGCGGCATTTGGTTAGTAGGTTGTACCCA
GCAAGCGGCTCCGCCAGTCAATAGTGATGTTTCGACTAATAACGAAACAACGGTTAATGACACAGACAGGCGCAAAAAAG
TCTTAACCACATTCACCGTGATCGCCGACATTGCCCAGAATGTGGCAGGCGATAAATTAATCGTTGAATCCATCACCAGA
ATTGGGGCCGAGATCCACGGCTACGAACCCACCCCCAGTGATCTCGTGCGGGCCCAGGATGCGGATTTATTGCTCTATAA
CGGCATGAATTTAGAACGGTGGTTTGAGCAATTTTTAGGCAATCTCAACGATGTCCCCGCCGTCATTGTGACCGAAGGCA
TTGAACCGATTCCCATTGCCGAAGGCCCCTATACCGACAAGCCCAATCCCCATGCTTGGATGTCGCCAAAAAATGCCCTG
GTTTATGTCGAAAATATCCGTCAAGCGTTTGTGGCACTCGATCCAGACAATGCGGCAACCTATAACGCCAATGCCGCTGC
CTACAGTGCCGAACTAGAGGCGATCGCCGCCGAATTTGAAGCTGATCTCAACCTTGTTCCCGCAGCACAACGGTTCCTCG
TCAGTTGTGAAGGCGCATTTTCTTACTTGGCCCAGGATTATGGCCTCGAAGAAATCTACATTTGGCCCATCAACGCCGAA
CAACAATTTACCCCCAAGCAAGTCCAGAGCGTCATCACCCAAGTTGAAGCTAACGATGTCCCCACCATTTTCTGTGAAAG
CACCGTCAGCGACGAAGGCCAAAAAGAAGTGGCTAAGGCGACGGGCGCCCGCTTTGGGGGGAACCTCTATGTCGATTCCC
TCTCAACCCCCGATGGCCCAGTGCCAACATTTTTAGATCTCCTCGAATATGACGTGCGGACGATCGCCAATGGTCTCCTT
GCGGGAACGGCCCAGTAA

Protein sequence : 
MIRINLPRQTLSLVGIVCGIWLVGCTQQAAPPVNSDVSTNNETTVNDTDRRKKVLTTFTVIADIAQNVAGDKLIVESITR
IGAEIHGYEPTPSDLVRAQDADLLLYNGMNLERWFEQFLGNLNDVPAVIVTEGIEPIPIAEGPYTDKPNPHAWMSPKNAL
VYVENIRQAFVALDPDNAATYNANAAAYSAELEAIAAEFEADLNLVPAAQRFLVSCEGAFSYLAQDYGLEEIYIWPINAE
QQFTPKQVQSVITQVEANDVPTIFCESTVSDEGQKEVAKATGARFGGNLYVDSLSTPDGPVPTFLDLLEYDVRTIANGLL
AGTAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-69 59
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-69 59
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-69 59
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-69 59
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-69 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_A1735 YP_001734980.1 periplasmic solute binding protein BAC0439 Protein 3e-71 59
SYNPCC7002_A1735 YP_001734980.1 periplasmic solute binding protein BAC0349 Protein 1e-69 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_A1735 YP_001734980.1 periplasmic solute binding protein VFG0525 Protein 1e-69 59