Gene Information

Name : SYNPCC7002_A1734 (SYNPCC7002_A1734)
Accession : YP_001734979.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Virulence
Product : ABC transporter family protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1820834 - 1821631 bp
Length : 798 bp
Strand : -
Note : similar to sll1599 of Synechocystis sp. PCC 6803

DNA sequence : 
ATGACTTACCCAATCCCAGAAATCGCCGTTGAGAATATCAGCGTCATCTACAGCAACACCCGCCTCGCCCTTTACAACAC
CAGTTGTCACGTCAAACCAGGCACCATCACCGCCCTTGTTGGCCCCAATGGTTGTGGTAAATCAACCCTGTTTAAATCGA
TTATGGGGTTTTTGAAACCGACCCAGGGGCGTGTCACGATTGCGGGTCAGTCGGTGCAGCAGGCCCAGAAAAAACAACTG
ATGGCCTATGTTCCCCAAGCCGATGAAGTGGATTGGAACTTTCCTGTGAGCGTGTTTGATGTGGTGATGATGGGTCGCTA
TGGCTATATGAATCTGCTACGGATTCCCAGTCAAAAAGACCGTCGTTTAGTGATGGAAAGTCTAGAGCGGGTAGATCTGG
TGGAATTTCGTCACCGTCAAATTGGCGAACTCTCCGGCGGCCAAAAAAAACGGGCTTTCCTCGCGCGGGCCTTGGCCCAG
GAAGGCAAAATTATTTTGCTCGATGAACCCTTTACGGGAGTTGATATCAAAACAGAAAAAAGCATCATCGATCTGTTGGT
GCAGTTGCGGGATGAGGGGCACACGATTTTAATCTCGACCCACGATCTTGCTTCGATCTCAACGTTCTGCGATCGCACAA
TCTTACTAAATCGCACCGTCCTCGCCGAAGGTTACACCGCTGATACCTTCACAGAAGAAAACCTCGTGATGACTTTTGGG
GGGTTACCCGTCGCCAGTCTCGAGAAATTATCCTCCCATTACCAACAGCAACCCAACAGTTTAGAAGTAGATCAATGA

Protein sequence : 
MTYPIPEIAVENISVIYSNTRLALYNTSCHVKPGTITALVGPNGCGKSTLFKSIMGFLKPTQGRVTIAGQSVQQAQKKQL
MAYVPQADEVDWNFPVSVFDVVMMGRYGYMNLLRIPSQKDRRLVMESLERVDLVEFRHRQIGELSGGQKKRAFLARALAQ
EGKIILLDEPFTGVDIKTEKSIIDLLVQLRDEGHTILISTHDLASISTFCDRTILLNRTVLAEGYTADTFTEENLVMTFG
GLPVASLEKLSSHYQQQPNSLEVDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-67 60
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-67 60
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-68 60
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-68 60
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-67 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_A1734 YP_001734979.1 ABC transporter family protein BAC0350 Protein 9e-68 60
SYNPCC7002_A1734 YP_001734979.1 ABC transporter family protein BAC0440 Protein 1e-72 58
SYNPCC7002_A1734 YP_001734979.1 ABC transporter family protein BAC0400 Protein 7e-47 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_A1734 YP_001734979.1 ABC transporter family protein VFG0526 Protein 9e-68 60