Gene Information

Name : glnA (SYNPCC7002_A1630)
Accession : YP_001734876.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 1709023 - 1710444 bp
Length : 1422 bp
Strand : -
Note : similar to slr1756 of Synechocystis sp. PCC 6803

DNA sequence :
ATGACCCAGACAGCAACCGATGTTTTACGGCTGATCCAAGAGGAAAATATTCAAATTATTGACCTCAAGTTTGTTGATCT
GCCAGGCATTTGGCAACATTGCTCGTTTTACCAAGATCAACTGGACGAAGCTTCCTTTGTTGATGGGGTGCCCTTTGACG
GTTCAAGCATTCGAGGCTGGAAAGCGATTAACGAATCTGATATGGCGATGGTGCCTGATCCCACAACCGCTTGGATCGAT
CCATTTTGTAAAGAAAAAACCCTCAGCCTCATTTGTTCCATCAAAGAACCCCGCACAGGGGAGTGGTACAGCCGTGATCC
CCGCAGCATTGCCCAAAAAGCCGTGGATTACCTCGCTGCCTCCGGCATTGGCGATACCGCCTATTTTGGCCCCGAAGCAG
AATTTTTCGTGTTTGATGATGTGCGCTTTGACCAGACGGAGAATAAAGGGTTTTATTACGTTGACAGCGTCGAGGGTCGC
TGGAATTCAGGCCGCAAAGAACCGGGGGGCAATCTCGCCCACAAACCGGGCTACAAACAAGGGTATTTCCCCGTACCACC
AACGGATACCCTCCAGGATATGCGCACAGAAATGCTACTGACCATGGCGAAATGCGGCGTTCCCATCGAAAAGCACCACC
ACGAAGTTGCCACCGGGGGCCAAAATGAATTGGGGTTTCGCTTTGCAACGCTCCTCAAGGCCGCAGATTATTTGATGACC
TATAAATATGTGATCAAAAATGTCGCCCGTAAGTATGGCCGCACCGTGACATTTATGCCGAAACCACTGTTTAACGACAA
CGGCTCCGGGATGCACACCCACCAATCTCTCTGGAAAGAAGGTCAACCACTATTTTGGGGCGATCGCTACGCCAATCTCA
GTCAACTGGCACTCCATTACATTGGTGGCATCCTCAAACACGCCCCAGCCCTGCTCGCTTTTTCTAATCCCAGTACCAAC
TCATACAAACGTCTTGTTCCCGGCTTCGAGGCCCCGGTGAATTTAGCCTATTCCCAAGGAAATCGTTCGGCGTCGGTGCG
CATTCCCCTGTCTGGGCCAAACCCCAAAGCCAAACGCCTTGAATTCCGTTGCCCTGATGCCACGGCCAACCCCTATCTAG
CCTTTGCGGCGATGCTCTGTGCGGGTATTGATGGCATTAAAAACGCCATTGATCCAGGTGATCCCCTAGATGTCGATATC
TACGATTTGACCCCAGAGGAACTGAGCAAAATTCCTTCAACCCCCGCTTCCCTAGAAGCTGCCCTCGAAGCCCTCCAACA
GGATCACGACTTTTTAACAGCAGGCGGTGTCTTTACGACAGATTTCATTGAGAATTGGATTGAGTACAAATTAGACGCCG
AAGTGAATCCCCTCCGGTTACGGCCCCATCCCTACGAATTTGCCCTTTATTACGATTGCTAA

Protein sequence :
MTQTATDVLRLIQEENIQIIDLKFVDLPGIWQHCSFYQDQLDEASFVDGVPFDGSSIRGWKAINESDMAMVPDPTTAWID
PFCKEKTLSLICSIKEPRTGEWYSRDPRSIAQKAVDYLAASGIGDTAYFGPEAEFFVFDDVRFDQTENKGFYYVDSVEGR
WNSGRKEPGGNLAHKPGYKQGYFPVPPTDTLQDMRTEMLLTMAKCGVPIEKHHHEVATGGQNELGFRFATLLKAADYLMT
YKYVIKNVARKYGRTVTFMPKPLFNDNGSGMHTHQSLWKEGQPLFWGDRYANLSQLALHYIGGILKHAPALLAFSNPSTN
SYKRLVPGFEAPVNLAYSQGNRSASVRIPLSGPNPKAKRLEFRCPDATANPYLAFAAMLCAGIDGIKNAIDPGDPLDVDI
YDLTPEELSKIPSTPASLEAALEALQQDHDFLTAGGVFTTDFIENWIEYKLDAEVNPLRLRPHPYEFALYYDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-101 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001734876.1 glutamine synthetase, type I VFG1399 Protein 6e-129 57