Gene Information

Name : SYNPCC7002_A1482 (SYNPCC7002_A1482)
Accession : YP_001734729.1
Strain : Synechococcus sp. PCC 7002
Genome accession: NC_010475
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1560998 - 1561714 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
ATGACCGACTCACCCATTGTTCTTTTTTGGATCCAACACCTTTCCAAGACCTATTACATCGGCGATGTGGCCGTACAAGC
CCTAAAAAATATCGATTTAGAATTATACGAGGGGGAATTTGTCGTGCTGTTGGGCGCTTCGGGGAGCGGCAAATCAACCT
TGCTAAATATTTTGGGGGGTTTAGATATTCCGAGTACGGGCGAAATTTTTTTTCGGGGCAAAAGTCTCACCACCGCTAAT
GAAGCGCAACTCACCCGTTACCGCCGCAACCATGTGGGCTTTGTGTTCCAATTTTATAATTTGATCCCAAGTCTGACCGC
CGCCGAAAACGTGGCCCTCGTAACGGATCTGGTGGCCCATGCCATGGCACCAACGGAGGCTTTGACCTTAGTGGGTTTAG
AGAATCGCCTCGATCATTTCCCGGCTCAACTATCGGGGGGCGAGCAACAACGGGTCGCGATCGCCCGGGCGATCGCCAAA
CAACCGGAGGTTTTGCTCTGCGATGAACCGACGGGAGCCTTAGATTTTCAAACCGGGAAACGGGTGCTGCAGGTGCTTGA
ACAGATTAATCGAGACCTGGGCACCACCGTCGCCGTAATTACCCATAATGCCGGGATTGCGGCCATGGCCGACCGGGTCT
TGCGGATGCGTAGTGGGGAAATTGTCGCCATCGAAACGAACGCGATTAAACAATCACCATTGCTTTTGGAGTGGTAG

Protein sequence : 
MTDSPIVLFWIQHLSKTYYIGDVAVQALKNIDLELYEGEFVVLLGASGSGKSTLLNILGGLDIPSTGEIFFRGKSLTTAN
EAQLTRYRRNHVGFVFQFYNLIPSLTAAENVALVTDLVAHAMAPTEALTLVGLENRLDHFPAQLSGGEQQRVAIARAIAK
QPEVLLCDEPTGALDFQTGKRVLQVLEQINRDLGTTVAVITHNAGIAAMADRVLRMRSGEIVAIETNAIKQSPLLLEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-35 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-35 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_A1482 YP_001734729.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-56 54
SYNPCC7002_A1482 YP_001734729.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-35 48
SYNPCC7002_A1482 YP_001734729.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-40 44
SYNPCC7002_A1482 YP_001734729.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 43
SYNPCC7002_A1482 YP_001734729.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-40 41