Gene Information

Name : SYNPCC7002_G0080 (SYNPCC7002_G0080)
Accession : YP_001733189.1
Strain :
Genome accession: NC_010474
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 90469 - 91302 bp
Length : 834 bp
Strand : +
Note : similar to alr3241 of Nostoc sp. PCC 7120

DNA sequence : 
ATGACATTATCACAGGCATTACAGGTACAACCGCCAGAATCTTCATGGTCATCTTTGCTTGAAGGGGAGCATCTGTTTGG
GGGCTATACCAAAAGGTCGGTTGTTCAGGATGTCAACTTAACGGTTCATCCAGGGGAATGGCTGACTATTGTGGGGGGCA
ATGGGTCGGGAAAATCTACCCTACTCCGACTTCTCAGTCGCATTCTCAAACCCCAACGGGGGGTAGTGCGCTTGGATGGC
AAAGCAATTCAGCGGCGATCGCCCCAGGAAATTGCCCGGAGTCTGGCGGTTTTACCCCAACAATCCCGGATTCCGATGGG
CTTAACGGTGCGGCAATTAGTCGGTTTAGGGAGAGCACCCCACCAGCGCTGGTGGCAGTGGGAATATAGCGAGGCGGATC
AGGCCCAAATTCATCAAGCCTTGGCCCAAACTCAACTGTTACCTTTTGCGGATCGCCCTGTGGCGCAACTGTCTGGCGGG
GAACGTCAACGGGCTTTTTTGGCTCTAGCCCTCGCCCAAAAGCCAAAGATTCTCATCTTGGATGAGCCCACAACGTTTCT
GGATATTCACTATCAACTGGAATTGTTGGATCTGCTTAAGCAGTTAAACCGCCAGCAAAATTTGACCATTGTCACCGTTC
TCCATGAGCTCAATTTGGCGACCCGTTACAGCGATCGCCTGGCCATGATTAAGGACGGCAAACTCTTTGCCCTAGGGACA
CCCGCTGCAGTGATCACCCCAGAAAATCTGCGGTTTGGCTTTGGGGTAGAAGCGGTGACAATGCCGACCCCCGTAGGGTT
ACAAGTCTGCGTTTTGGGGCCAGCCTCGGTTTAA

Protein sequence : 
MTLSQALQVQPPESSWSSLLEGEHLFGGYTKRSVVQDVNLTVHPGEWLTIVGGNGSGKSTLLRLLSRILKPQRGVVRLDG
KAIQRRSPQEIARSLAVLPQQSRIPMGLTVRQLVGLGRAPHQRWWQWEYSEADQAQIHQALAQTQLLPFADRPVAQLSGG
ERQRAFLALALAQKPKILILDEPTTFLDIHYQLELLDLLKQLNRQQNLTIVTVLHELNLATRYSDRLAMIKDGKLFALGT
PAAVITPENLRFGFGVEAVTMPTPVGLQVCVLGPASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-37 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-37 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-30 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-30 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-30 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_G0080 YP_001733189.1 iron compound ABC transporter, ATP-binding protein BAC0164 Protein 1e-37 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYNPCC7002_G0080 YP_001733189.1 iron compound ABC transporter, ATP-binding protein VFG1042 Protein 1e-37 44
SYNPCC7002_G0080 YP_001733189.1 iron compound ABC transporter, ATP-binding protein VFG0925 Protein 2e-33 42