Gene Information

Name : yagB (ECDH10B_0253)
Accession : YP_001729211.1
Strain : Escherichia coli K-12
Genome accession: NC_010473
Putative virulence/resistance : Virulence
Product : CP4-6 prophage; hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 253713 - 254063 bp
Length : 351 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAAGACTCTACTCAAACTTGGGGGCTTAAACGAGATATCACACCGTGTTTCGGAGCACGACTGGTGCAGGAAGG
TCATCGTCTGCATTTTCTGGCTGACCGGGCTGGATTCACCGGCTCATTCAGTGAGGTGCAGACTCTACAACTGGATGAAG
CCTTCCCGCATTTTGTCGCACATCTGGAGCTGATGCTGCTCTCCTGTGAGCTGAATCCCAGGTACGCGCACTGTGTCACA
CTGTACCGTAACGGGCTGACTGGTGAAGCCGATACGCTGGGCAGTCATGGGTATGTATATATCGCAATTTTGAATCGCCA
CGGGTTTAACAGACACCTCCGAGTCATTTAA

Protein sequence :
MNKDSTQTWGLKRDITPCFGARLVQEGHRLHFLADRAGFTGSFSEVQTLQLDEAFPHFVAHLELMLLSCELNPRYAHCVT
LYRNGLTGEADTLGSHGYVYIAILNRHGFNRHLRVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 8e-26 67
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 8e-26 67
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 5e-26 67
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 3e-25 66
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 3e-25 66
Z1220 NP_286755.1 structural protein Not tested TAI Protein 5e-25 66
Z1658 NP_287161.1 structural protein Not tested TAI Protein 5e-25 66
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 2e-24 65
unnamed AAL08477.1 unknown Not tested SRL Protein 3e-25 64
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 7e-25 62
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 6e-25 61
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 6e-25 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yagB YP_001729211.1 CP4-6 prophage; hypothetical protein VFG0662 Protein 2e-26 67
yagB YP_001729211.1 CP4-6 prophage; hypothetical protein VFG1681 Protein 1e-25 66
yagB YP_001729211.1 CP4-6 prophage; hypothetical protein VFG1068 Protein 1e-25 64
yagB YP_001729211.1 CP4-6 prophage; hypothetical protein VFG1619 Protein 2e-25 61