|
Name : intZ (ECDH10B_2607) Accession : YP_001731371.1 Strain : Escherichia coli K-12 Genome accession: NC_010473 Putative virulence/resistance : Unknown Product : CPZ-55 prophage; integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2648558 - 2649853 bp Length : 1296 bp Strand : + Note : - DNA sequence : TTGCCTAAACACGCCCGTTATTCATCACGCCGAACGCGCCGGATACATGATCGGGGTTATCCAGTCGTTAAATCAAGGTA TCCGGTTTTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCG ATTCACTGACGCCGGGGCTGTTTTTGCTGGTGCATCCCAACGGTTCGAAATACTGGCGATTCAGGTATTGGCTGAATAAA CGAGAGTTTTTGCAGGCCATTGGAGTTTACCCGCTAATCACACTCAAAGAAGCACGCAGGCGCGCCACGGAGAGCAGATC CCTTATTGCCAATGGAATTAACCCAGTGGAACAAGCCCGCAAGGAAAAAGCCATTGATGCGCTCAACATGGCGGCAGGAT TTAAGAAGGTGGCGGAAGACTGGTTTGCTACCAGGGTTGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCA CTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCA GAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCA CCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATA CCGATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCT TATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACAT TGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAG TTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTTGTCAGCCAGCGCGATACTTAA AGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAAT CAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGTCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCT GCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCC TCTAGAACCGGAATGA Protein sequence : MPKHARYSSRRTRRIHDRGYPVVKSRYPVLSKTPLTAKAIDAAQPQDKPYKLTDSLTPGLFLLVHPNGSKYWRFRYWLNK REFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQARKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSA LEKDVYPVLGKRSIVDITARDVLALLQKKERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNAWI PISEIPAFYKALERAGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAEVMKARRPHVVPLSRQAVELLQDQ FTRSGYSAFVFPGRFMDKPLSASAILKALERIGYKSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKGIRGVYNQA AYLKQRRAMMQDYADAIDSILAGNGNPLEPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 9e-73 | 44 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 4e-71 | 43 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 4e-72 | 43 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 2e-72 | 43 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 1e-70 | 43 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 8e-71 | 43 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 1e-70 | 43 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 3e-70 | 42 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 3e-70 | 42 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 4e-70 | 42 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 4e-70 | 42 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 1e-67 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| intZ | YP_001731371.1 | CPZ-55 prophage; integrase | VFG0598 | Protein | 4e-71 | 43 |
| intZ | YP_001731371.1 | CPZ-55 prophage; integrase | VFG0783 | Protein | 2e-70 | 42 |
