Gene Information

Name : tnpR (ECDH10B_1363)
Accession : YP_001730246.1
Strain : Escherichia coli K-12
Genome accession: NC_010473
Putative virulence/resistance : Resistance
Product : resolvase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1393231 - 1393782 bp
Length : 552 bp
Strand : -
Note : -

DNA sequence : 
ATGCGACTTTTTGGTTACGCACGGGTATCAACCAGCCAGCAATCTCTCGATATTCAGGTTCGGGCACTCAAAGACGCAGG
CGTGAAAGCAAATCGCATCTTTACTGACAAGGCATCGGGCAGTTCAAGCGATCGGAAAGGGCTGGACTTGCTGAGGATGA
AGGTGGAGGAAGGTGACGTCATCTTGGTGAAGAAACTTGACCGCCTTGGGCGCGATACTGCTGACATGATCCAGTTAATA
AAAGAGTTTGACGCCCAAGGTGTATCCATTCGGTTTATTGATGACGGAATCAGTACCGATGGGGAGATGGGTAAAATGGT
TGTCACTATTCTATCTGCAGTGGCCCAGGCAGAACGACAGAGAATACTAGAGCGTACCAATGAAGGTCGCCAAGAGGCAA
TGGCAAAAGGAGTTGTTTTTGGTAGAAAAAGAAAAATAGATAGAGATGCAGTATTAAATATGTGGCAACAGGGGTTAGGT
GCCTCACATATATCAAAAACAATGAATATTGCTCGTTCAACAGTATATAAAGTAATAAATGAAAGCAACTAA

Protein sequence : 
MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLI
KEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLG
ASHISKTMNIARSTVYKVINESN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 5e-69 82
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 5e-69 82
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 5e-69 82
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 2e-68 82
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 4e-60 80
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 7e-62 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR YP_001730246.1 resolvase GU371926.1.gene95.p0 Protein 9e-69 82