Gene Information

Name : xerD (LCK_00676)
Accession : YP_001727952.1
Strain : Leuconostoc citreum KM20
Genome accession: NC_010471
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 718096 - 718992 bp
Length : 897 bp
Strand : +
Note : COG4974L

DNA sequence :
ATGACACAACAAATTGAAGATGCAATTTCGGATTATATACACTACATTCGAATCGAACGTGGGCTATCCGAAAATACCAT
TACAAGTTATCGTCAGGATTTGAATCAATTCGGTATGTATTTATCTCAAGAGCATTTACTATTGGGAGAAGTTGATCATA
TCGTTGTTTTGTCGTGGTTAAATCGCTTACGAACAAACGGTAAATCCAACAGTTCAGTCATCCGAATGGTCACCTCTTTA
CGTCGTTTTTTTGGCTATCTCACTCAGGAAAATATGATTACGCATAATCCAATGAGTCATGTAAAGCCGCCTAAGAAAGC
CGCACATTTACCCGCAGTTTTAAGTTTTGAAGAAATTGATACACTTTTAGGCGTGCCAGTACCTAGTACACCTTTGGGGA
TGCGAAATCGGACCTTATTAGAGGTGATGTACGCTACAGGCTTGCGTGTGAGTGAGCTGGTTAATCTGAAAATGAGTGAT
TTACATATACAATTAGGTCTCATTCAGACGCTTGGTAAGGGCGATAAAGAGCGGATTATACCAATCGGTGAAGTGGCAGT
TGATTGGTTAGAACGATACTTTGCTGGTGCTCGTTTAACGCTGTTAAAAGCGCAAGAATCACCTTACGTATTTGTTAACG
ATCGTGGTGGTCAGTTAACAAGGCAAGGTGTTTGGAAGATTATTAAAAAATTGGTACTGGAAGCTGGCATTACAAAAGAT
GTTTCACCGCATACATTGCGTCATTCTTTTGCAACGCATATTCTTGAAAATGGTGCTGATTTACGTATTGTGCAAGAGTT
ATTAGGCCATGCCGACATTTCGACAACTCAAATATATACTCACATTTCAAAAAAGCGATTAAGTGAAGTATACGATGAGT
ACCACCCACGCGCATAA

Protein sequence :
MTQQIEDAISDYIHYIRIERGLSENTITSYRQDLNQFGMYLSQEHLLLGEVDHIVVLSWLNRLRTNGKSNSSVIRMVTSL
RRFFGYLTQENMITHNPMSHVKPPKKAAHLPAVLSFEEIDTLLGVPVPSTPLGMRNRTLLEVMYATGLRVSELVNLKMSD
LHIQLGLIQTLGKGDKERIIPIGEVAVDWLERYFAGARLTLLKAQESPYVFVNDRGGQLTRQGVWKIIKKLVLEAGITKD
VSPHTLRHSFATHILENGADLRIVQELLGHADISTTQIYTHISKKRLSEVYDEYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-54 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-54 45