Gene Information

Name : LCK_00067 (LCK_00067)
Accession : YP_001727344.1
Strain : Leuconostoc citreum KM20
Genome accession: NC_010471
Putative virulence/resistance : Virulence
Product : helix-turn-helix motif-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 66473 - 66673 bp
Length : 201 bp
Strand : -
Note : COG1476K

DNA sequence :
TTGGAAATAGTTAATCGTGTTCAGCATTATCGTAAGCAAGCTAACCTAACACAAGAAAAATTAGCGCAATTAGCCCATGT
TTCTCGAAAAACGATTAACTCTTTAGAACATGGGCATTACACACCATCGTTGTTATTGGCTTTGCAGATATCAAAAATAC
TTAACTTAGATATCAATGTTATCTTCAGTATAAAGGAATAA

Protein sequence :
MEIVNRVQHYRKQANLTQEKLAQLAHVSRKTINSLEHGHYTPSLLLALQISKILNLDINVIFSIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-04 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 8e-05 42
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 6e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCK_00067 YP_001727344.1 helix-turn-helix motif-containing protein VFG2175 Protein 3e-05 42
LCK_00067 YP_001727344.1 helix-turn-helix motif-containing protein VFG2168 Protein 3e-05 42