|
Name : serS (LCK_01609) Accession : YP_001728876.1 Strain : Leuconostoc citreum KM20 Genome accession: NC_010471 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1678282 - 1679592 bp Length : 1311 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATATAAAATATTTACGGAAAAATGTGGCAGAGGCAACTCGCCGTTTACAGGATCGAGGCATCGAATCTGAGAA GTTAACGACATTATTAAGTTTGGATAAAGCGCGTCGTGAGGCGATACAACAGGTAGAAAGCCTAAAAGCTCAAAGAAATG AAGTCTCTGATAAAATTGCTTACGCGAAGCGTAATAAAACTGATGCTAGTGAGGCTATTCTTGCAATGCAAGAAGTCGGA TCAAAGATCAAAGCACTGGATGCAAGACAAGCAAGTCTTGATATGGAAGTTAAAAATTTAGCAGCTCATCTTCCTAACTT AGCTGCGTCTGATGTGCCGGTAGGACCTGATGAAGCAGCAAATGTTGAACAACGTGTTTGGGAACCTAAGACATATGGCC AAAGATTGAAAGCACACCAAGAGGCACCAGAATGGTTAAAAGCACATTATGAAGTGGGCGAGACGCTTGGTATTTTAGAT TTTGAAAGGGGTGCTAAGGTATCAGGAGCACGTTTTCTTTATTATGTGGGTGATGGCGCACGACTTGAGCGAGCTGTGTA TAATTTCATGTTAGATGAGCACCGTCAAGAAGGCTACACTGAAATGATTACGCCAATTGTGGTTAATGATGCTGCGATGT TTGGCACCGGTCAATATCCTAAATTTCAAGACGATGCGTATCGTGTTGAGGGACTTGAACAGACTTATATTCCGACTGCT GAAGTGCCATTAACTAATTATTATTCAGGGGAAACACTACCAGCTGAAGACTTGCCGATTAAATTTACAGCGTTATCACC ATCATTTCGTAAAGAGGCAGGTGCTGCTGGTAAAGATACGCGTGGCTTAATTCGGCTACATCAATTCAATAAAGTTGAAA TGGTGAAGTTTACTAAGCCTGAACAATCATATGAAGAGCTTGAAAGTATGACGGCCAATGCAGAAAATATTCTGCAGAAA CTTGGGTTACCATATCATGTCATTATGCTGTCAACCGGCGATATGGGCTTTTCAGCAGCTAAAACATATGACGTTGAAGT TTGGATGCCACAACAACAAGTTTACCGAGAAATATCTTCTGTCTCAAATACGGAGGACTTTCAAGCGCGTCGCATGCATA TCACATATCGCAATGAAGCAGGACAACTAGCTCTGGTTCATACGCTTAATGGTTCTGGCCTTGCTGTAGGAAGAACCGTA GCTGCTATATTAGAGAATTACCAAAATCCCGATGGTAGTGTGACAGTGCCTGAGGTGCTACGCCCTTATTTGGGTGGCCA AGATAAATTGATGGCAACGCCACATCATTAA Protein sequence : MLDIKYLRKNVAEATRRLQDRGIESEKLTTLLSLDKARREAIQQVESLKAQRNEVSDKIAYAKRNKTDASEAILAMQEVG SKIKALDARQASLDMEVKNLAAHLPNLAASDVPVGPDEAANVEQRVWEPKTYGQRLKAHQEAPEWLKAHYEVGETLGILD FERGAKVSGARFLYYVGDGARLERAVYNFMLDEHRQEGYTEMITPIVVNDAAMFGTGQYPKFQDDAYRVEGLEQTYIPTA EVPLTNYYSGETLPAEDLPIKFTALSPSFRKEAGAAGKDTRGLIRLHQFNKVEMVKFTKPEQSYEELESMTANAENILQK LGLPYHVIMLSTGDMGFSAAKTYDVEVWMPQQQVYREISSVSNTEDFQARRMHITYRNEAGQLALVHTLNGSGLAVGRTV AAILENYQNPDGSVTVPEVLRPYLGGQDKLMATPHH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-126 | 63 |
