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Name : clpC (LCK_01606) Accession : YP_001728873.1 Strain : Leuconostoc citreum KM20 Genome accession: NC_010471 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity, ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1671954 - 1674419 bp Length : 2466 bp Strand : - Note : COG0542O DNA sequence : ATGGATAACAAATATACATCAAGTGCACAGAATGTGCTGGTTTTGGCACAAGAACAAGCAAAATATTTTAAACACCAGGC TGTAGGAACAGAGCACCTATTGTTAGCCTTAGCAATTGAAAAAGAAGGCATTGCAAGCAAAATTCTTGGCCAATTCAACG TGACCGATGATGATATTCGCGAGGAAATTGAACATTTTACCGGTTATGGCATGACATCGCGCTATGATAAAAATGTCTAT TTACCCTATTCGCCAAAAGCTGGCGACATACTTCGTCAATCAGGCGAAGAATCACGCGCGCTAGCACAGACCCAAGTTGG TACAGAGCATGTGCTGTTAGCCTTATTACAGGATGAGAGTATCTTATCATCGCGTATTTTATTAGCGTTGGATGCCAATT TACAAGAAATGCGCCGAGCAATTTTGCGGAAACTTGGTGTCACCGATGTACGCAAGCAAATGAAGCAACGTGACAAACAG CAATCACAAGGGACACCAACCCTGGATAGTTTGGCACGTAACTTAACACAACGTGCTAAAGATAATAAAATGGATCCCAT TATTGGGCGCTCAAAAGAGGTGCGTCGTGTTGTACAAATTTTGTCACGACGTACAAAAAATAATCCGGTATTGATTGGTG AACCAGGTGTTGGTAAAACAGCTATAGCTGAAGGTTTAGCGCAAAGAATTATTGCTAATGATGTTCCAGACACATTGAAA AATAAGCGATTGATGGCATTAGATATGGGCTCTCTGGTCGCTGGCACAAAGTACCGTGGTGAATTTGAAGATCGCTTGAA GAAAATTATTGAAGAGATTTATCAAGATGGACAGGTGATTCTGTTTATCGATGAGCTACATACTTTAATTGGTGCTGGCG GGGCTGAAGGGGCTATCGACGCTTCAAACATTTTAAAGCCAGCTTTAGCAAGAGGTGAATTACAGACCTTGGGCGCAACG ACTTTTGATGAATATCAAAAATATGTCGAGTCGGATGCAGCCTTGGAGCGACGATTTGCGCCGGTGACGGTGGATGAGCC ATCACAAGAAGATGCCATCAGTATTTTGAAGGGTATTCGTTCTAAATTTGAAAGTCATCATCAAGTAGCGATTGATGATG CTGCGATTATTGCTGCAGTAAAACTATCATCGCGGTATATTACAGACCGTTTTTTGCCTGATAAGGCGATTGATTTAATG GACGAAGCTGGTGCGAAGGTTCGTATTGATGCGATTAATCGGCCAAACCCAGTGAATAAAAACAAAGCCAAATTGGCTGA GACAGTTGCGGCTAAAGAAGCAGCAATTACTGCGCTTGATTTTGAAGGTGCAGCTAAATTGCGCACCGAAGAAGTACGCT TAAAAAAGCGTATCAATAAAGCTGAAGCAAAGTTGGCGGATGATACACAACAAAATTACCATCTTCACGTGACTGAAGAA GATATTGCAGAAGTAATTTCACAGCAAACGGGTGTACCGTTAACGCAACTGGAGAAAAATGAACAGCAGCGTTTAGTCAA TTTAGAAGCTGTCCTTGGTCGACGTGTCATTGGTCAGAAAGCAGCGATTTCTGCTGTGGCACGTGCAATTCGTCGTGCAC GTTCAGGCTTGAAAGACCCTAATCGGCCAATTGGTACTTTTATGTTTTTGGGTCCAACAGGTGTCGGTAAAACAGAGCTT GCTAAGGCATTAGCGGAAGCCATGTTTGGTAGTCAAGAAAATATGATTCGTATTGATATGTCGGAATATCAAGAACGTTG GTCAGCTTCTCGACTTGTAGGCTCAGCACCAGGTTACGTAGGATATGATGAAGGTGGACAGCTAACCGAACAAGTGAGAA ACCATCCTTATTCCGTGGTGTTACTGGATGAAGCAGAAAAAGCGCACCAAGATATTTTTAATTTGATGCTACAAGTGTTT GACGATGGTTTTTTGACGGATTCAAAAGGCCGTAAAGTTGATTTTCGTAATACAATTATCATCATGACTTCTAACTTGGG GGCAACACGTTTGCGTGATGAAAAATCAGTTGGTTTTGGCGCAGTTGATTTGAAAAATAATCATGCTGCGATGGCTGAAA AAATTCGTGAGACGCTAAAAGAAACATTCCGTCCAGAATTTATTAATCGCTTGGATGAAGCGGTCGTATTTGAACCACTA ACAAAAGATGAGTTACATCAAATTGTTAAATTAATGAGCCGCACAGTACTACAGCGCGTAGCAGAGCAAGGTATATCTGT TAAAATAACGCCTGCAGCGATTGATGTCGTTGCTAGTGCCGGATTTGATCCAGAGTATGGTGCACGACCAATTCGACGGG CTTTGCAGACAAAGATTGAAGACGTTTTGAGTGAAGAATTGTTGCGTGGTCAGATTACCACTGATACGACTGTGACGATT GGTGCGAAAAACGGGGATATTAGACTAAGCATTAAACCTATCGATAAAGTAGCAGCTAAAGCTTAA Protein sequence : MDNKYTSSAQNVLVLAQEQAKYFKHQAVGTEHLLLALAIEKEGIASKILGQFNVTDDDIREEIEHFTGYGMTSRYDKNVY LPYSPKAGDILRQSGEESRALAQTQVGTEHVLLALLQDESILSSRILLALDANLQEMRRAILRKLGVTDVRKQMKQRDKQ QSQGTPTLDSLARNLTQRAKDNKMDPIIGRSKEVRRVVQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIIANDVPDTLK NKRLMALDMGSLVAGTKYRGEFEDRLKKIIEEIYQDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTLGAT TFDEYQKYVESDAALERRFAPVTVDEPSQEDAISILKGIRSKFESHHQVAIDDAAIIAAVKLSSRYITDRFLPDKAIDLM DEAGAKVRIDAINRPNPVNKNKAKLAETVAAKEAAITALDFEGAAKLRTEEVRLKKRINKAEAKLADDTQQNYHLHVTEE DIAEVISQQTGVPLTQLEKNEQQRLVNLEAVLGRRVIGQKAAISAVARAIRRARSGLKDPNRPIGTFMFLGPTGVGKTEL AKALAEAMFGSQENMIRIDMSEYQERWSASRLVGSAPGYVGYDEGGQLTEQVRNHPYSVVLLDEAEKAHQDIFNLMLQVF DDGFLTDSKGRKVDFRNTIIIMTSNLGATRLRDEKSVGFGAVDLKNNHAAMAEKIRETLKETFRPEFINRLDEAVVFEPL TKDELHQIVKLMSRTVLQRVAEQGISVKITPAAIDVVASAGFDPEYGARPIRRALQTKIEDVLSEELLRGQITTDTTVTI GAKNGDIRLSIKPIDKVAAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-174 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_001728873.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0079 | Protein | 0.0 | 56 |
| clpC | YP_001728873.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0080 | Protein | 5e-139 | 49 |
