|
Name : rpsN (LCK_01103) Accession : YP_001728374.1 Strain : Leuconostoc citreum KM20 Genome accession: NC_010471 Putative virulence/resistance : Unknown Product : 30S ribosomal protein S14 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0199 EC number : - Position : 1146047 - 1146316 bp Length : 270 bp Strand : - Note : located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese DNA sequence : ATGGCAAAAAAGTCAAAAATTGCTAAGGCACAAAAGCGTGAAGCTTTAGTTGCAAAGTACGCTGATAAGCGTGCGGCATT GAAGGCTGCTGGAGATTTCATCGGTTTGGCTGCTTTGCCAAAGGATTCATCTCCCGTACGTATGCACAATCGTGACTTGA TTGATGGACGTCCTCATGCTTACATGCGTGAATTTGGTATGTCACGTTTGAACTTCCGTCAATTGGCACATAAGGGTCAA ATCCCTGGTGTTCGCAAGGCTTCTTGGTAA Protein sequence : MAKKSKIAKAQKREALVAKYADKRAALKAAGDFIGLAALPKDSSPVRMHNRDLIDGRPHAYMREFGMSRLNFRQLAHKGQ IPGVRKASW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpsN | NP_814350.1 | 30S ribosomal protein S14 | Not tested | Not named | Protein | 2e-20 | 66 |
| ef0103 | AAM75306.1 | EF0103 | Not tested | Not named | Protein | 2e-20 | 66 |
