Gene Information

Name : LCK_p100015 (LCK_p100015)
Accession : YP_001727242.1
Strain :
Genome accession: NC_010470
Putative virulence/resistance : Resistance
Product : protein-tyrosine-phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 11798 - 12202 bp
Length : 405 bp
Strand : +
Note : COG0394T

DNA sequence : 
ATGAAAAAAGTTTATTTTTTGTGTACGGGAAATTCGTGCCGTAGCCAAATGGCAGAAGGATATGCAAAACAAATATTGCC
AGCTAATAATTTTAAAATTGAAAGTGCGGGAGTTGAAGCTCATGGGCTAAACCCAATGACAATCAAAGTTATGGCTGAAG
ATGGAGTTGATATTAGTAAACAGTATTCAAAATTAATTGATTTACAATATTTTAATACGGCAGATATCATTATTACTTTA
TGTGGTGATGCGAAAGATAAGTGCCCAATGATTCCAGCACAAACTAAAAGCCTGCACTGGCCTTTATCGGATCCAGCACA
AACAAAGGGAACTATTGAGGAACAACTACAAGAATTCCGGAATATTCGAGATCAAATTAAAGCATTAATTACCGAATTAA
AATAG

Protein sequence : 
MKKVYFLCTGNSCRSQMAEGYAKQILPANNFKIESAGVEAHGLNPMTIKVMAEDGVDISKQYSKLIDLQYFNTADIIITL
CGDAKDKCPMIPAQTKSLHWPLSDPAQTKGTIEEQLQEFRNIRDQIKALITELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 2e-27 47
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-26 45
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 5e-25 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LCK_p100015 YP_001727242.1 protein-tyrosine-phosphatase BAC0581 Protein 1e-31 56
LCK_p100015 YP_001727242.1 protein-tyrosine-phosphatase BAC0580 Protein 5e-28 46
LCK_p100015 YP_001727242.1 protein-tyrosine-phosphatase BAC0032 Protein 7e-27 45