Gene Information

Name : EcolC_0868 (EcolC_0868)
Accession : YP_001723864.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Virulence
Product : transcriptional regulator CadC
Function : -
COG functional category : K : Transcription
COG ID : COG3710
EC number : -
Position : 931392 - 932201 bp
Length : 810 bp
Strand : -
Note : PFAM: transcriptional regulator domain protein; KEGG: kpn:KPN_00272 putative sensory transducer

DNA sequence : 
ATGTACTGGATTATTAACGATAATATCGAGTTCTGGCCTGAGCACCGAAAATTAATATCGGTACATAACGCCGATCTTAA
CGTCGTTCTGACAACGCCAGCCAGTCGATGTTTATCACTTCTACTTGAAGCTTTTCCTGATGTGGTTGCACAACAAGATT
TTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAGACGC
GGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAAGATCCATAATGACAT
TAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGG
GATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTG
AGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAA
GATTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAAAGAGTTCGATAAATATA
AAACACGGATACTGGATTCGGGGATTAACTGTAAAAAACATCCGTGGTTATACTTCCCTCTTGCAAAATCCTCACCGGGG
ATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAGACTGTTTAACCCTGTCTTACCGTGAGGTTAA
TCGTGATTGA

Protein sequence : 
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRR
GFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIML
SAFVIGAYSAYWLWNNNQPKPFFKDYKIVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPG
MIVMACNKNYNQHEVADCLTLSYREVNRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 3e-122 99
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 1e-52 41
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 1e-52 41
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 2e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcolC_0868 YP_001723864.1 transcriptional regulator CadC VFG0570 Protein 5e-53 41