Name : EcolC_0860 (EcolC_0860) Accession : YP_001723856.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Virulence Product : lytic transglycosylase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : - Position : 926054 - 926428 bp Length : 375 bp Strand : - Note : PFAM: Lytic transglycosylase catalytic; KEGG: stt:t4248 hypothetical protein DNA sequence : ATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAA CAGAGATAAGAATAACAATATAAAGAGTTTAGATTATGGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAA AATGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATAT AACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAA GAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAACTAG Protein sequence : MFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYGLMQINQMHIPLLKKCGIIKDERDLLDNPCLNIKIGTEILY NHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ECs3711 | NP_311738.1 | hypothetical protein | Not tested | LIM | Protein | 2e-46 | 91 |
pilT | NP_458636.1 | putative membrane protein | Virulence | SPI-7 | Protein | 8e-25 | 52 |
pilT | NP_807847.1 | hypothetical protein | Virulence | SPI-7 | Protein | 8e-25 | 52 |
pilT | AAC98888.1 | PilT | Virulence | SPI-7 | Protein | 5e-25 | 52 |
iagB | YP_217796.1 | cell invasion protein | Virulence | SPI-1 | Protein | 3e-14 | 42 |
iagB | NP_461798.1 | invasion protein precursor | Virulence | SPI-1 | Protein | 3e-14 | 42 |
iagB | NP_457271.1 | cell invasion protein | Virulence | SPI-1 | Protein | 2e-14 | 42 |
iagB | NP_806480.1 | cell invasion protein | Virulence | SPI-1 | Protein | 2e-14 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
EcolC_0860 | YP_001723856.1 | lytic transglycosylase | VFG0539 | Protein | 9e-15 | 42 |