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Name : EcolC_0852 (EcolC_0852) Accession : YP_001723850.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Virulence Product : type III secretion system needle protein Function : - COG functional category : - COG ID : - EC number : - Position : 921841 - 922056 bp Length : 216 bp Strand : + Note : TIGRFAM: type III secretion system needle protein; KEGG: cvi:CV_2422 cell invasion protein - cytoplasmic DNA sequence : ATGGATATCAGCAAACAATTTGATCAGGGCGTTGATGATCTGAACCAGCAAGTTGAAAAAGCGTTGGAGGTTTTAGCAAC CAATCCCTCCGACCCGAAATTTCTTGCCGAATATCAAAGTGCATTAGCTGAGTATACATTATATCGAAATGCGCAATCTA ACGTTGTAAAAGCGTATAAAGATCTTGATTCAGCAATCATACAAAACTTCCGCTAA Protein sequence : MDISKQFDQGVDDLNQQVEKALEVLATNPSDPKFLAEYQSALAEYTLYRNAQSNVVKAYKDLDSAIIQNFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECs3718 | NP_311745.1 | EprI | Not tested | LIM | Protein | 1e-25 | 99 |
| prgI | AAX49613.1 | PrgI | Virulence | SPI-1 | Protein | 2e-17 | 66 |
| prgI | YP_217792.1 | cell invasion protein | Virulence | SPI-1 | Protein | 3e-17 | 66 |
| prgI | NP_461794.1 | needle complex major subunit | Virulence | SPI-1 | Protein | 3e-17 | 66 |
| prgI | NP_457267.1 | pathogenicity 1 island effector protein | Virulence | SPI-1 | Protein | 3e-17 | 65 |
| prgI | NP_806476.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 3e-17 | 65 |
| ysaG | AAS66835.1 | YsaG | Not tested | SSR-1 | Protein | 2e-15 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcolC_0852 | YP_001723850.1 | type III secretion system needle protein | VFG0535 | Protein | 9e-18 | 66 |
| EcolC_0852 | YP_001723850.1 | type III secretion system needle protein | VFG0996 | Protein | 2e-15 | 62 |
| EcolC_0852 | YP_001723850.1 | type III secretion system needle protein | VFG2466 | Protein | 1e-14 | 56 |
