Gene Information

Name : EcolC_0728 (EcolC_0728)
Accession : YP_001723730.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 783110 - 783409 bp
Length : 300 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: sfv:SFV_2924 IS3 ORF1

DNA sequence :
ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGC
TGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACTGCTCTACAACTGGCGCAGTAAACAGC
AAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGG
GATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA

Protein sequence :
MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESLLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAER
DEELAILQKAATYFAKRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC28568.1 YIS1_SHISO Not tested LEE Protein 1e-38 99
unnamed AAL57518.1 transposase 2 Not tested LEE Protein 1e-38 99
unnamed AAL57580.1 transposase 2 Not tested LEE Protein 1e-38 99
ECO111_3733 YP_003236069.1 putative IS3 transposase InsE Not tested LEE Protein 2e-38 99
S4064 NP_839234.1 IS3 orfA Not tested SHI-2 Protein 1e-29 81
SF3703 NP_709442.1 IS3 ORF1 Not tested SHI-2 Protein 1e-29 81
unnamed AAT48700.1 transposon-related Not tested PAI II 4787 Protein 4e-29 81
yis1_SHISO CAD66178.1 hypothetical protein of insertion element IS1 Not tested PAI III 536 Protein 4e-29 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcolC_0728 YP_001723730.1 transposase IS3/IS911 family protein VFG0603 Protein 3e-30 81
EcolC_0728 YP_001723730.1 transposase IS3/IS911 family protein VFG1632 Protein 2e-29 81