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Name : EcolC_0053 (EcolC_0053) Accession : YP_001723066.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 54119 - 55294 bp Length : 1176 bp Strand : - Note : PFAM: integrase family protein; KEGG: spe:Spro_0108 integrase family protein DNA sequence : ATGGCTCTAACCGATACACAGATCAAACGTGCAAAACCACAAGACAAGCCATACACATTGAACGATGGACAAGGTCTGTC GTTGCTTATCAATCCAGATGGCACGAAAGGCTGGCGTTTCCGTTTCAGATTTGCTGGGAAAGCGCGGTTAATGTCATTTG GCAGCTATGATTTAGTAAGCCTCGCAGAAGCACGTGAGAAGCGTGACATCGCCCGTAAGCAGGTTGCTAATGGCATTGAC CCAGTAGAGGAACGCAAAGCTTTAAGACTCGCTCAAAAGCTATCAACAGAAAATTCTTTCGAAGCAATATGTCGAGAATG GCATACCAACAAAGCTGACCGCTGGACGGTGGCCTATCGAGAAGAAATTATGAAGACTTTTGAGCAAGATGTATTCCCTT TCATTGGTAAACGCCCTATCAGTGAAATTAAACCATTAGAACTGCTCGAAGTATTGCGAAGAATAGAAAAGCGTGGGGCA TTAGAGAAGACCAGAAAAGTGCGGCAAAGATGTGGTGAAGTCTACCGCTATGCGATCATAACTGGCCGTGCTGAATACAA TCCTGCGCCTGATTTAGCCATCGCTCTGGCTGTTCCTAAGCAAAAACATCATCCTTTTTTATCCGCTGAAGAGCTACCTC ATTTCATTCAGGATTTGGAAGCGTATACCGGAAGTATCATTACTAAAAATGCTACTAAGATAGTTATGCTGACCGGCGTT AGAACGCAGGAAATGCGTTTGGCTACTTGGAATGAGGTTGATCTTGAGAAAGGCATATGGGAAATACCTGCAGAAAGGAT GAAAATGCGTAGGCCACACATTGTTCCTTTATCTACTCAGGTAATTGCCCTTTTCGAACAACTCAAGCCTATTACCGGCC ATTACCCCTACATATTTATTGGAAGGAACAATCGTAGCAAACCAATTTCAAAAGAAAGCGTATCTCAAGTAATTGAGTTA CTTGGTTACAAAGGACGTGCTACAGGTCACGGTTTTAGACATTCATTATCGACAATCTTACATGAACATGGATTTGATAG TGCATGGATTGAGATGCAATTAGCACATGTTGATAAAAACAGTATAAGAGGTACTTATAATCATGCTCAATATTTAGAGA AAAGATTACATATGATGCAGTGGTATAGTGACTTACTTTATCCAAAAATAAAATAA Protein sequence : MALTDTQIKRAKPQDKPYTLNDGQGLSLLINPDGTKGWRFRFRFAGKARLMSFGSYDLVSLAEAREKRDIARKQVANGID PVEERKALRLAQKLSTENSFEAICREWHTNKADRWTVAYREEIMKTFEQDVFPFIGKRPISEIKPLELLEVLRRIEKRGA LEKTRKVRQRCGEVYRYAIITGRAEYNPAPDLAIALAVPKQKHHPFLSAEELPHFIQDLEAYTGSIITKNATKIVMLTGV RTQEMRLATWNEVDLEKGIWEIPAERMKMRRPHIVPLSTQVIALFEQLKPITGHYPYIFIGRNNRSKPISKESVSQVIEL LGYKGRATGHGFRHSLSTILHEHGFDSAWIEMQLAHVDKNSIRGTYNHAQYLEKRLHMMQWYSDLLYPKIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 4e-138 | 70 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 2e-138 | 70 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 3e-137 | 69 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 3e-137 | 69 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 4e-137 | 69 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 4e-137 | 69 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-136 | 69 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 1e-135 | 69 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 9e-136 | 69 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 1e-135 | 69 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 9e-111 | 57 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 1e-110 | 54 |
| intA | AAB00935.1 | integrase A | Not tested | vap locus | Protein | 1e-58 | 41 |
| int | AAN62223.1 | putative integrase | Not tested | PAGI-3(SG) | Protein | 3e-61 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcolC_0053 | YP_001723066.1 | integrase family protein | VFG0783 | Protein | 2e-137 | 69 |
| EcolC_0053 | YP_001723066.1 | integrase family protein | VFG0598 | Protein | 5e-136 | 69 |
