Gene Information

Name : EcolC_3447 (EcolC_3447)
Accession : YP_001726389.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3760936 - 3761427 bp
Length : 492 bp
Strand : +
Note : KEGG: sdy:SDY_1008 hypothetical protein

DNA sequence :
ATGAAGTTATCCCTGACGGTAGAAGCCGACGCCATCAACGTTCTGGCCCTGAATGCGGGCCGGATCGCTGTGGATATTGA
CGGCATTGAACTGGCTGCGCTGATCGATGTGGTCTGTGATAACGGTTATTCCCTTCGCGTTGCTGACTCCCCCGGAAAGC
TGGTCGTTGAAGATCCGCTTCCACCCGTCGCCCGCGTTAATGGCATCCAGTGCAGTACCGCGCATATTACGGAGAAAGAC
AACGCTCTGCTGTTTACTCTTTCACACCAGAATGAAGACTTTGGTGAGTCGGAATGGATTAGTTACACCGGGTCGGGTTA
TCTGCTCCACCTGGGTGCCTGGTCATTTCCGGTCTTACGCCTCAAACGTCTCGGTCTGTCGAAAGCCTGCCGTCGGTTAG
TAGTGACGCTTATCCGTCGCTACGCCGTTGGCATTGTTCATCTGGATGCCTTTGGCGAAGTGCTGCCGGGCTTTGACATT
TTCGACTGGTAA

Protein sequence :
MKLSLTVEADAINVLALNAGRIAVDIDGIELAALIDVVCDNGYSLRVADSPGKLVVEDPLPPVARVNGIQCSTAHITEKD
NALLFTLSHQNEDFGESEWISYTGSGYLLHLGAWSFPVLRLKRLGLSKACRRLVVTLIRRYAVGIVHLDAFGEVLPGFDI
FDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 7e-50 68
unnamed AAL08479.1 unknown Not tested SRL Protein 5e-49 68
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 2e-49 68
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 2e-49 68
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 5e-40 68
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 4e-47 67
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-47 66
unnamed AAL57574.1 unknown Not tested LEE Protein 3e-41 66
unnamed AAC31487.1 L0008 Not tested LEE Protein 6e-49 66
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 6e-49 66
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 9e-49 66
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 9e-49 66
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 2e-47 65
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 3e-46 64
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 5e-44 64
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 6e-46 64
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 2e-46 64
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 9e-47 64
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 2e-46 63
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 2e-46 63
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 3e-44 63
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-44 62
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-44 62
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 6e-41 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcolC_3447 YP_001726389.1 hypothetical protein VFG1621 Protein 3e-50 68
EcolC_3447 YP_001726389.1 hypothetical protein VFG1070 Protein 2e-49 68
EcolC_3447 YP_001726389.1 hypothetical protein VFG0787 Protein 3e-49 66
EcolC_3447 YP_001726389.1 hypothetical protein VFG1683 Protein 4e-47 64
EcolC_3447 YP_001726389.1 hypothetical protein VFG0664 Protein 6e-47 63
EcolC_3447 YP_001726389.1 hypothetical protein VFG1531 Protein 1e-44 63