Gene Information

Name : EcolC_3445 (EcolC_3445)
Accession : YP_001726387.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3760152 - 3760511 bp
Length : 360 bp
Strand : +
Note : PFAM: YagBYeeUYfjZ family protein; KEGG: sfx:S3203 putative structural protein

DNA sequence :
TTGTCGAATAAAATACCGACAGTAAACCACGATATCACTGAACCCTGGTGGGGGCTTAAACGCAGTATCACGCCCTGTTT
TGGCGCACGGCTGGTGCAGTCGGGCAACTGTCTGCATTATCTCGCTGACCGGGCCAGCATCACCGGACAGTTCAGCGACG
GGGATTTACGGCATCTCGACCAGGCATTTCCACTGCTGCTCAAACAGCTTGAACTGATGCTCACCAGCGGTGAACTCACT
CCCCGCCATCAGCACTGTGTCACGCTCTATGCAAAAGGGCTGACCTGCGAGGCCGACTCCCTCGGCTCGCATGGTTACGT
ATACCTGGCGATTTATCCGACACCAGCGGCAACCGCGTAA

Protein sequence :
MSNKIPTVNHDITEPWWGLKRSITPCFGARLVQSGNCLHYLADRASITGQFSDGDLRHLDQAFPLLLKQLELMLTSGELT
PRHQHCVTLYAKGLTCEADSLGSHGYVYLAIYPTPAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 1e-36 77
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 9e-36 75
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 2e-36 74
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 3e-35 74
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 1e-36 73
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 1e-36 73
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-37 73
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-37 73
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 5e-37 72
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 2e-36 71
Z1220 NP_286755.1 structural protein Not tested TAI Protein 1e-35 70
Z1658 NP_287161.1 structural protein Not tested TAI Protein 1e-35 70
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 4e-36 70
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-35 70
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 2e-35 69
unnamed AAL08477.1 unknown Not tested SRL Protein 7e-36 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcolC_3445 YP_001726387.1 hypothetical protein VFG1681 Protein 7e-37 74
EcolC_3445 YP_001726387.1 hypothetical protein VFG0662 Protein 3e-37 73
EcolC_3445 YP_001726387.1 hypothetical protein VFG1619 Protein 9e-37 71
EcolC_3445 YP_001726387.1 hypothetical protein VFG1068 Protein 3e-36 69