Gene Information

Name : EcolC_3442 (EcolC_3442)
Accession : YP_001726384.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Virulence
Product : antirestriction protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3758925 - 3759395 bp
Length : 471 bp
Strand : +
Note : PFAM: Antirestriction protein; KEGG: sdy:SDY_4589 hypothetical protein

DNA sequence :
ATGACCGATAACACTCTGCCACTGTTCACACCCGCAGCAGATGCTCCTGCTGCGGCTCAGCATCAGATTATCGCTATACC
GGTAACCGATGAGAACCGCATCAGCTTCTGGCCGCAGCACTTTGGCAGCATTCCGCAGTGGATAATCCTTGAGCCGACCA
TCTTCGCGTGGATGGACCGCTTCTGCACGGACTACAGCGGCGGCATCTGGAATTTTTACACGCTGAGCAACGGCGGCGCG
TTTATGGCCCCGGAAGTGGAGAACGATGAACTCTGGTCGCTGTTTAACACGATGAACGGCAACGGCGGTGACATGAGTGC
CGAAGCTGCAGGGATTGCGGTCTGTCTGATGGCTTTCAGCCACCATGCCTGCCGTACCGAATGCGACGCCATGACGGAGC
ACTACTACCGCCTGCGGGACTACGCGCTCAACCACGCGGAATGCAACGCCATCATGCACATCATCGACTGA

Protein sequence :
MTDNTLPLFTPAADAPAAAQHQIIAIPVTDENRISFWPQHFGSIPQWIILEPTIFAWMDRFCTDYSGGIWNFYTLSNGGA
FMAPEVENDELWSLFNTMNGNGGDMSAEAAGIAVCLMAFSHHACRTECDAMTEHYYRLRDYALNHAECNAIMHIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 3e-46 75
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 1e-43 75
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 3e-43 74
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 3e-43 74
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-46 74
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 4e-45 74
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 1e-43 74
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 4e-46 74
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 1e-43 74
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-43 73
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-42 73
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-43 73
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-42 73
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-42 73
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 3e-42 72
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 8e-45 72
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 8e-45 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcolC_3442 YP_001726384.1 antirestriction protein VFG0659 Protein 1e-43 74
EcolC_3442 YP_001726384.1 antirestriction protein VFG1677 Protein 6e-47 74
EcolC_3442 YP_001726384.1 antirestriction protein VFG1527 Protein 2e-46 74
EcolC_3442 YP_001726384.1 antirestriction protein VFG1616 Protein 3e-45 72