Gene Information

Name : EcolC_3439 (EcolC_3439)
Accession : YP_001726381.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4924
EC number : -
Position : 3756957 - 3757409 bp
Length : 453 bp
Strand : +
Note : KEGG: sfx:S3197 hypothetical protein

DNA sequence : 
ATGAACAACATGCTGAAAAGTGTTATTTCCGCTGCGACCCTGAGTCTGTGTCTGCTGACACCCGCTCATGCAGAAGAGCA
ACGTTATATCAGTATCCGCAATACGGACACTGTGTGGGTGCCTGGTAATATCTGTGTTTACCGGTTCCGCCTTGACAACG
GCGGCAGCGGGGAAGGCTTCGGGCCACTGACCCTTTCCCTGCGCCTGAAAGACAAACAGGGTAATACACTGGCTGTGGGG
GAGATGGGCGTTGAGCCGTTTGGCGACAGCGATGCCTCCCGAACTCAGGATGCCTCACTGGAACATGAATGTGTGGAAAA
CGTCAGTTCCGTCGAAATCATGAAGGCGACGGAAGCCTCTGAGGGTTACCAGACTGACCTGCCGCTGTCCGTGTTTGACC
CGCAGTATTATCGTCCACTACCGGTGTCGGTTGCCGGAGGTAAGGCATCCTGA

Protein sequence : 
MNNMLKSVISAATLSLCLLTPAHAEEQRYISIRNTDTVWVPGNICVYRFRLDNGGSGEGFGPLTLSLRLKDKQGNTLAVG
EMGVEPFGDSDASRTQDASLEHECVENVSSVEIMKATEASEGYQTDLPLSVFDPQYYRPLPVSVAGGKAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00476.1 unknown Not tested SHI-1 Protein 7e-40 61
S3197 NP_838481.1 hypothetical protein Not tested SHI-1 Protein 2e-40 60
SF2993 NP_708767.1 hypothetical protein Not tested SHI-1 Protein 2e-40 60
unnamed AAW51752.1 Aec69 Not tested AGI-3 Protein 7e-40 59
unnamed ADD91706.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 7e-40 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcolC_3439 YP_001726381.1 hypothetical protein VFG0657 Protein 7e-41 60