Gene Information

Name : EcolC_3433 (EcolC_3433)
Accession : YP_001726375.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Virulence
Product : HSR1-like GTP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 3752875 - 3753750 bp
Length : 876 bp
Strand : +
Note : PFAM: GTP-binding protein HSR1-related; KEGG: ypi:YpsIP31758_0759 putative GTPase

DNA sequence :
ATGACTAAACCTCACGGCCTTCAGGCCCTTGAACAACCGCTGGCGTCGCTTCCCGATACGCTTCGCCAGCTTATTCTTGA
ACGTATTCAGAATCTCACCCACTATGAGCCGGTGATTGGTATCATGGGCAAAAGCGGTGCCGGTAAGTCTTCGCTCTGTA
ACGAACTCTTCCGGGGTGAGGTCTCCCCCGTCAGTGATGTGAACGCCTGTACCCGTGAAGTGCTGCGCTTCCGGCTGCGC
AGCGGGCGTCACAGTCTGGTGATTGTTGATTTACCGGGTGTGGGAGAAAACGGGCAACGGGACCATGAATACCGTGCCCT
GTACCGGCGTATGCTGCCGGAACTGGACCTGGTTCTGTGGGTCATTAAGTCCGATGACCGGGCGCTGTCGGTGGACGAGC
AGTTCTGGCGCGGTGTGATGCAGCCTTACCAGCAGCAGGTGGTGTTCGTGATTAACCAGGCCGACAAAATAGAACCCAGC
CATGAATGGGATACCCGTTCTGGTACTCCCTCAGCACAGCAACAGAAAAATCTTCAGGAAAAGCAGGTTGCCATTACCAC
GATGTTTAAGCCACATCACCCGGTCTGCGTGGTATCCGCATGTACCGGATGGGGCGTGGAGGATATGGTAGCAACCATGA
TGCGCTGTCTGCCGGACCGCGCCACCAGCCCAGTAGCGACACAGTTGCACGGGAGGCTCTGCACGGAGCCGGTAAAGTCG
CAGGCCCGTGACGGCTTCGGTGAGGCGGTGGGGCGGGTGTTCGATACGGCAGAATCATCGTTATTCCTGCCTGCGCCGCT
GAAGACGGTGATACGTACCGTGCGTGATGCTGTGGTGTCTGTAGCCCGCGCGGTCTGGGACTGGATCTTCTTCTGA

Protein sequence :
MTKPHGLQALEQPLASLPDTLRQLILERIQNLTHYEPVIGIMGKSGAGKSSLCNELFRGEVSPVSDVNACTREVLRFRLR
SGRHSLVIVDLPGVGENGQRDHEYRALYRRMLPELDLVLWVIKSDDRALSVDEQFWRGVMQPYQQQVVFVINQADKIEPS
HEWDTRSGTPSAQQQKNLQEKQVAITTMFKPHHPVCVVSACTGWGVEDMVATMMRCLPDRATSPVATQLHGRLCTEPVKS
QARDGFGEAVGRVFDTAESSLFLPAPLKTVIRTVRDAVVSVARAVWDWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99256.1 unknown Not tested LEE Protein 9e-75 61
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 4e-74 60
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-74 60
unnamed AAL08471.1 unknown Not tested SRL Protein 5e-75 60
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 1e-74 60
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 3e-75 60
Z1210 NP_286745.1 histone Not tested TAI Protein 8e-75 60
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 8e-75 60
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 3e-74 60
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 1e-74 60
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 1e-74 60
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 1e-74 60
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-72 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcolC_3433 YP_001726375.1 HSR1-like GTP-binding protein VFG1062 Protein 3e-75 60
EcolC_3433 YP_001726375.1 HSR1-like GTP-binding protein VFG0654 Protein 2e-74 60
EcolC_3433 YP_001726375.1 HSR1-like GTP-binding protein VFG1674 Protein 2e-75 60