Gene Information

Name : fliP (EcolC_3387)
Accession : YP_001726333.1
Strain : Escherichia coli ATCC 8739
Genome accession: NC_010468
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 3705985 - 3706737 bp
Length : 753 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAAACGCAGCACTCAACTGACGCTGGGTCTTGGGCTGCTGGCGCTTGCGCCGCTGGCAATCGCCCAGGGCGGCGATAT
TGCGCTGCTTAACGTGGTGACCCACGGCAACACTCAGGAGTACAGCGTCAAAATTCAGGTGTTGATTCTGATGACCCTCG
TCGGTTTGCTGCCGACGATGGTGCTGATGATGACCTGCTTTACGCGTTTTATTATCGTGCTGTCGCTGCTGCGCCAGGCG
CTGGGGCTACAACAAACGCCGCCAAACCGCATTCTGATTGGTATTGCGCTCTCCCTCACCATGCTGGTGATGCGCCCTAT
CTGGCTCAATATTTACGACCACGCGGTGGTGCCGTTCGAAAACGATCGGATTACCCTGACCGATGCGTTAAGTACCGCCG
CGACGCCACTCAAACGCTTTATGCTGGCGCAGACAGATAAAAAAGCGATGGCGCAAATCATGACCATCGGAGGCGCGAAG
GGCAATGCCGCCGACCAGGATCTCTCCATCGTGGTGCCTGCCTATGTGTTGAGCGAACTGAAAACCGCCTTCCAGATTGG
CTTTATGATTTACATCCCGTTTCTGGTTATCGACCTGATTGTCGCAAGCGTGTTGATGGCGATGGGGATGATGATGCTGT
CGCCGCTGATCGTTTCGCTGCCGTTTAAACTGATGCTGTTTGTGCTGATCGACGGCTGGTCGCTGACCATCGGCACGCTC
ACCACCAGCATTCGCGGGCTGGGGCTGGGCTGA

Protein sequence : 
MKRSTQLTLGLGLLALAPLAIAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTMVLMMTCFTRFIIVLSLLRQA
LGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVVPFENDRITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAK
GNAADQDLSIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL
TTSIRGLGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 4e-24 44
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 4e-24 43
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 2e-23 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 2e-23 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-30 41
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-30 41
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 1e-24 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-30 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-27 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-27 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-27 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 9e-25 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 9e-31 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001726333.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-57 57
fliP YP_001726333.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-54 54
fliP YP_001726333.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-50 51
fliP YP_001726333.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-47 49