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Name : EcolC_3384 (EcolC_3384) Accession : YP_001726330.1 Strain : Escherichia coli ATCC 8739 Genome accession: NC_010468 Putative virulence/resistance : Virulence Product : putative sigma-54 specific transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 3703400 - 3704386 bp Length : 987 bp Strand : - Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: ypi:YpsIP31758_0629 sigma-54 dependent transcriptional regulator DNA sequence : ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCATTTAACGTGCC GGTGCTCATTCAGGGCGAAACCGGCGCGGGCAAAGAATGCGTGGCGAAATATATTCACACCGTAGCCTTTGGTGAAAATG ATAACGCGCCCTATATCGGCGTGAACTGCGCGGCGATCCCAGAAAATATGCTGGAAGCGACCTTATTTGGCTACGACAAA GGCGCATTTACCGGCGCAATTGCCAGCGTACCTGGAAAAATGGAACTGGCGAATAACGGCACCTTATTGCTCGATGAAAT TGGCGATATGCCGCTGGCATTACAGGCCAAAATATTACGCGTATTGCAGGAACAGCTGGTTGAGCGATTAGGCAGCAACC GACAAATTAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAACCTTGAACAGGAAGTCGCTGCCGGGCGTTTTCGT GAAGATCTCTATTATCGCCTGGCGGTTATTCCTATTACCATGCCGCCGCTGCGTGAACGTCTGAACGATATTATTCCGCT GGCAGAGTCATTTATTAAAAAATACTCCACGGTGCTGGTGAAAAATATCACCCTTTCAGAATCTACCCGCCGGGCGCTGC TCAATTACCGCTGGCCCGGCAACGTGCGCCAGCTGGAGAACGCCATACAGCGGGGAATGATCTTAAACCGCGACGGCGTA ATTTACCTCGATGCGTTAGGCCTGCCGGAAAATGACATTGCCGACCGCAGCGAACTGCAATGGCCTGTTCAGCCCGCCGT CCACATTGCCGAAACCAGCGATTTGGGCCAGCACGGACGAAGCGCCCAGTATCAATATATCGCTGACCTGATGCGTAAAT ATCAGGGCAACCGCAGCAAAATCGCCGACCTGTTAGGCATTACCCCGCGCGCACTGCGCTATCGACTGGCCTCCATGCGC AAGCAAGGTATCGAAGTTTTCTCCTGA Protein sequence : MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENDNAPYIGVNCAAIPENMLEATLFGYDK GAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQLVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFR EDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRALLNYRWPGNVRQLENAIQRGMILNRDGV IYLDALGLPENDIADRSELQWPVQPAVHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMR KQGIEVFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 4e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcolC_3384 | YP_001726330.1 | putative sigma-54 specific transcriptional regulator | VFG1249 | Protein | 3e-69 | 47 |
